←Back to structures
ORF1
Euk-VirTacheng_Tick_Virus_6
ORF1__YP_009304417__Tacheng_Tick_Virus_6__1608088
Identity
- Accession:
- YP_009304417 ↗
- Protein ID:
- ORF1
- Kingdom:
- euk
Quality
52.4
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Lispiviridae›
Ganiavirus›
Tacheng_Tick_Virus_6
TaxID: 1608088
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 168-294
D2
high
residues 311-451
Domain cluster:
rep: hypothetical_protein_1__YP_009336884__Hubei_rhabdo-like_virus_3__1923187__D257-400
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o6mA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.56 | 31.0 | 2.80e-01 | 75.9% | 37.9% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.53 | 28.0 | 3.48e-01 | 73.0% | 83.1% |
| 1ny9A00 | 1.10.490.50 | Mainly Alpha › Orthogonal Bundle › Globin-like › Antibiotic binding domain of TipA-like multidrug resistance regulators | 0.53 | 34.0 | 3.99e-01 | 85.1% | 95.7% |
| 1ynbA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 40.0 | 3.81e-01 | 80.9% | 89.8% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 31.0 | 3.47e-01 | 80.1% | 77.8% |
| 3gi8C00 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.50 | 43.0 | 3.10e-01 | 95.0% | 87.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3573542 | 566.1.1.0 ↗ | alpha complex topology › P40 nucleoprotein-like › P40 nucleoprotein-related › P40 nucleoprotein-related | 0.84 | 69.0 | 5.06e-01 | 87.9% | 36.4% |
| 2996711 | 566.1.1.1 ↗ | alpha complex topology › P40 nucleoprotein-like › P40 nucleoprotein-related › P40 nucleoprotein-related › Paramyxo_ncap | 0.76 | 60.0 | 4.27e-01 | 87.2% | 28.8% |
| 3511477 | 566.1.1.0 ↗ | alpha complex topology › P40 nucleoprotein-like › P40 nucleoprotein-related › P40 nucleoprotein-related | 0.76 | 66.0 | 4.83e-01 | 93.6% | 37.1% |
| 3185762 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.57 | 46.0 | 3.43e-01 | 87.9% | 92.6% |
| 4822245 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.55 | 30.0 | 3.00e-01 | 77.3% | 47.6% |
| 3964288 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 38.0 | 3.14e-01 | 78.0% | 75.7% |
D3
medium
residues 40-143