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ORF1a
Euk-VirPorcine_astrovirus_2
ORF1a__YP_009010979__Porcine_astrovirus_2__1105378
Identity
- Accession:
- YP_009010979 ↗
- Protein ID:
- ORF1a
- Kingdom:
- euk
Quality
66.3
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Stellavirales›
Astroviridae›
Mamastrovirus›
Porcine_astrovirus_2
TaxID: 1105378
Cluster
View cluster (19 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-102
D2
high
residues 415-563
Domain cluster:
rep: 100_kDa_protein__YP_008130303__Citrus_vein_enation_virus__1301220__D379-571
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05579.20 best | Peptidase_S32 | 25.0 | 1.50e-05 | 94.6% | 37.0% |
| PF13365.13 | Trypsin_2 | 54.8 | 2.50e-14 | 81.2% | 100.0% |
D3
high
residues 715-804
Domain cluster:
rep: NSP1a__YP_009041463__Bovine_astrovirus__1435485__D684-783
D4
medium
residues 242-360