ORF1ab

Euk-Vir

Sichuan_takin_astrovirus

ORF1ab__YP_009480536__Sichuan_takin_astrovirus__2220003

Identity

70.0 mean pLDDT

Orthornavirae› Pisuviricota› Stelpaviricetes› Stellavirales› Astroviridae› Sichuan_takin_astrovirus

TaxID: 2220003

View cluster (4 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 364-515

PDB

Domain cluster: rep: 100_kDa_protein__YP_008130303__Citrus_vein_enation_virus__1301220__D379-571

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF13365.13 best	Trypsin_2	49.1	1.50e-12	79.6%	100.0%

D2 high residues 680-748

PDB

Domain cluster: rep: nsp1ab__YP_009010952__Bovine_astrovirus_B170_HK__1027244__D724-780

D3 high residues 1178-1247

PDB

Domain cluster: rep: ORF1b,_partial__YP_005271208__Astrovirus_wild_boar_WBAstV-1_2011_HUN__1137931__D442-513

D4 medium residues 13-71

PDB

D5 medium residues 178-309

PDB

D6 medium residues 867-987

PDB

Domain cluster: rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	36.4	3.70e-09	95.9%	24.7%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4871000	304.48.1.8 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1	0.83	77.0	5.85e-01	100.0%	48.3%
None	—		0.81	76.0	5.25e-01	100.0%	35.2%
1173784	304.48.1.8 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1	0.80	76.0	5.23e-01	100.0%	35.0%
3254023	304.48.1.1 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1	0.70	64.0	5.33e-01	99.2%	64.4%
3250871	304.48.1.0 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like	0.68	60.0	5.62e-01	95.9%	82.0%
3241316	304.48.1.1 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1	0.68	59.0	4.28e-01	94.2%	69.3%
3473558	304.48.1.1 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1	0.67	61.0	4.93e-01	100.0%	57.4%