←Back to structures

ORF1b,_partial

Euk-Vir

Astrovirus_VA4

ORF1b,_partial__YP_006905856__Astrovirus_VA4__1247113

Identity

Accession:
YP_006905856 ↗
Protein ID:
ORF1b,_partial
Kingdom:
euk

Quality

93.7 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Stellavirales› Astroviridae› Astrovirus_VA4

TaxID: 1247113

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 437-517
PDB
Domain cluster: rep: ORF1b,_partial__YP_005271208__Astrovirus_wild_boar_WBAstV-1_2011_HUN__1137931__D442-513
D2 medium residues 19-99_122-229_273-331
PDB
Domain cluster: rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 35.3 8.20e-09 76.2% 41.8%
D3 medium residues 100-121_230-272_332-436
PDB
Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009333212__Beihai_astro-like_virus__1922353__D104-144_202-314
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 45.0 8.90e-12 61.8% 23.3%