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ORF23

Euk-Vir

Human_gammaherpesvirus_8

ORF23__YP_001129376__Human_gammaherpesvirus_8__37296

Identity

Accession:: YP_001129376 ↗
Protein ID:: ORF23
Kingdom:: euk

Quality

81.3 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Human_gammaherpesvirus_8

TaxID: 37296

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-137

PDB

Domain cluster: rep: tegument_protein_UL88__YP_002608280__Human_herpesvirus_5__10359__D21-114_139-191

D2 high residues 196-299

PDB

Domain cluster: rep: ORF_23__NP_065522__Alcelaphine_gammaherpesvirus_1__35252__D202-301

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04682.18 best	Herpes_BTRF1	149.4	1.80e-43	100.0%	39.4%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2i53A02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.57	42.0	4.20e-01	78.8%	74.8%
1ichA00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.54	41.0	4.38e-01	82.7%	97.7%
4o6kA00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.53	37.0	3.45e-01	73.1%	77.2%
6cc0A02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	28.0	3.36e-01	76.0%	77.1%
4mn0A00	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.52	37.0	3.16e-01	74.0%	44.8%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2845	101.1.10.17 ↗	alpha arrays › HTH › HTH › Cyclin-like › CycT2-like_C	0.57	42.0	4.22e-01	78.8%	75.5%
3241490	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.56	41.0	4.11e-01	78.8%	76.4%
3248745	627.1.1.1 ↗	alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9	0.55	44.0	3.94e-01	86.5%	92.4%
3944331	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.54	28.0	3.16e-01	76.0%	65.0%
3971990	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.54	30.0	3.30e-01	76.0%	65.9%
4578719	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.54	29.0	3.56e-01	74.0%	85.7%
4030763	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.53	27.0	3.34e-01	73.1%	78.5%
3941764	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.53	26.0	3.32e-01	76.0%	78.5%
3288592	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.52	27.0	3.33e-01	74.0%	80.0%
3972272	101.1.3.0 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like	0.52	28.0	3.26e-01	76.0%	73.3%
4486954	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.51	28.0	2.93e-01	74.0%	56.8%
4007717	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.51	29.0	3.27e-01	76.0%	72.5%
4071326	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.51	27.0	3.06e-01	76.0%	67.5%
3974013	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.51	26.0	3.25e-01	70.2%	83.3%
3286174	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.50	27.0	3.15e-01	74.0%	72.0%
3931221	101.1.10.1 ↗	alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N	0.50	37.0	3.24e-01	78.8%	58.2%

D3 high residues 309-403

PDB

Domain cluster: rep: ORF23__YP_009042002__Bovine_gammaherpesvirus_6__1504288__D308-400

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04682.18 best	Herpes_BTRF1	145.1	3.80e-42	100.0%	36.7%