ORF24

Euk-Vir

Retroperitoneal_fibromatosis-associated_herpesvirus

ORF24__YP_010084388__Retroperitoneal_fibromatosis-associated_herpesvirus__111469

Identity

70.0 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Retroperitoneal_fibromatosis-associated_herpesvirus

TaxID: 111469

View cluster (22 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 217-344

PDB

Domain cluster: rep: ORF16__NP_733869__Callitrichine_gammaherpesvirus_3__106331__D190-345

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03043.21 best	Herpes_UL87	104.2	1.00e-29	100.0%	24.9%

D2 medium residues 5-25_78-131

PDB

Domain cluster: rep: ORF24__YP_001129377__Human_gammaherpesvirus_8__37296__D7-20_78-121

D3 medium residues 26-77_132-213

PDB

Domain cluster: rep: hypothetical_protein__YP_009551834__Rhinolophus_gammaherpesvirus_1__2054179__D30-81_138-219

D4 medium residues 409-597

PDB

D5 medium residues 598-728

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03043.21 best	Herpes_UL87	208.6	2.30e-61	96.2%	24.6%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2fnaA03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.61	24.0	3.04e-01	97.7%	57.5%
1r6bX03	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.61	34.0	3.97e-01	70.2%	79.5%
2vlaA03	1.10.10.2090	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.55	34.0	3.58e-01	98.5%	66.7%
1td6A03	1.10.472.40	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3	0.53	34.0	4.04e-01	84.7%	93.5%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3665609	129.1.1.16 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11	0.53	29.0	3.09e-01	72.5%	58.3%
2946	4979.1.1.1 ↗	alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › C-terminal domain of Hypothetical protein MPN330 › C-terminal domain of Hypothetical protein MPN330 › DUF3196	0.53	34.0	4.04e-01	84.7%	93.5%
3786400	5051.1.1.7 ↗	alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Nramp	0.53	41.0	2.92e-01	84.0%	91.5%