ORF28

Euk-Vir

Callitrichine_gammaherpesvirus_3

ORF28__NP_733881__Callitrichine_gammaherpesvirus_3__106331

Identity

87.5 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Lymphocryptovirus› callitrichine_gammaherpesvirus_3

TaxID: 106331

View cluster (76 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-122

PDB

Domain cluster: rep: deoxyribonuclease__YP_009551847__Rhinolophus_gammaherpesvirus_1__2054179__D9-136

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	93.1	2.40e-26	100.0%	23.9%

D2 medium residues 123-155_428-461

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	23.8	2.50e-05	50.7%	7.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3821377	7512.1.1.6 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20	0.53	47.0	3.15e-01	100.0%	70.8%

D3 medium residues 156-241_359-427

PDB

Domain cluster: rep: Exonuclease__YP_214099__Murid_betaherpesvirus_1__10366__D221-282_429-473_511-556

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	117.8	7.50e-34	57.4%	19.5%
PF01771.24	Viral_alk_exo	60.0	2.60e-16	45.8%	15.4%

D4 medium residues 242-358

PDB

Domain cluster: rep: BGLF5__YP_010087479__Phascolarctid_gammaherpesvirus_1__2249313__D240-334_400-410

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	164.2	6.50e-48	100.0%	25.8%