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ORF29

Euk-Vir

Macaca_nemestrina_rhadinovirus_2

ORF29__YP_010084571__Macaca_nemestrina_rhadinovirus_2__123630

Identity

Accession:
YP_010084571 ↗
Protein ID:
ORF29
Kingdom:
euk

Quality

77.0 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Macaca_nemestrina_rhadinovirus_2

TaxID: 123630

Cluster

View cluster (63 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-134
PDB
Domain cluster: rep: ORF29A__YP_010084577__Macaca_nemestrina_rhadinovirus_2__123630__D25-83_114-155
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02500.23 best DNA_pack_N 33.3 6.10e-08 85.7% 34.0%
D2 medium residues 137-211
PDB
Domain cluster: rep: cleavage_packaging_protein__YP_004207870__Cricetid_gammaherpesvirus_2__1605972__D137-212
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02500.23 best DNA_pack_N 84.1 2.00e-23 100.0% 28.4%
D3 medium residues 212-349
PDB
Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03237.22 best Terminase_6N 28.3 1.90e-06 97.1% 51.6%
PF02500.23 DNA_pack_N 175.5 2.50e-51 70.3% 35.8%
D4 medium residues 350-424
PDB
D5 medium residues 440-457_615-676
PDB
Domain cluster: rep: DNA_packaging_terminase_subunit_1__YP_004940252__Saimiriine_betaherpesvirus_4__1535247__D425-441_605-646
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02499.23 best DNA_pack_C 84.8 9.30e-24 98.8% 17.7%
D6 medium residues 458-614
PDB
Domain cluster: rep: tegument_protein_UL16__YP_010087586__Cervid_alphaherpesvirus_3__2115790__D494-638_653-663
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02499.23 best DNA_pack_C 200.0 8.30e-59 100.0% 43.9%