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ORF2
Euk-VirShayang_Fly_Virus_2
ORF2__YP_009300665__Shayang_Fly_Virus_2__1608066
Identity
- Accession:
- YP_009300665 ↗
- Protein ID:
- ORF2
- Kingdom:
- euk
Quality
47.8
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Sigmavirus›
Shayang_Fly_Virus_2
TaxID: 1608066
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 169-240
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vyiA00 | 1.20.120.820 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphoprotein, C-terminal domain | 0.64 | 57.0 | 4.95e-01 | 100.0% | 81.1% |
| 2k47A00 | 1.10.8.440 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Vesicular stomatitis virus phosphoprotein C-terminal domain | 0.56 | 45.0 | 4.54e-01 | 100.0% | 94.5% |
| 3jyhA02 | 1.20.120.980 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine carboxypeptidase S28, SKS domain | 0.54 | 45.0 | 3.68e-01 | 97.2% | 73.8% |
| 1jr8A00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.54 | 43.0 | 3.78e-01 | 100.0% | 59.0% |
| 4y0bA00 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.53 | 44.0 | 3.71e-01 | 100.0% | 92.1% |
| 3vdpA01 | 1.10.8.420 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecR Domain 1 | 0.53 | 34.0 | 3.83e-01 | 100.0% | 90.4% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 32.0 | 3.37e-01 | 83.3% | 69.7% |
| 3p9dG01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.51 | 42.0 | 3.04e-01 | 100.0% | 89.7% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 39.0 | 3.40e-01 | 90.3% | 86.3% |
| 2ba0A03 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.50 | 41.0 | 3.94e-01 | 90.3% | 90.4% |
| 1ii2A03 | 3.90.228.20 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.50 | 41.0 | 2.96e-01 | 100.0% | 51.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2863102 | 4069.1.1.0 ↗ | alpha arrays › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain | 0.65 | 57.0 | 4.99e-01 | 100.0% | 81.5% |
| 137455 | 4069.1.1.2 ↗ | alpha arrays › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain › PP_M1 | 0.64 | 56.0 | 4.96e-01 | 100.0% | 84.1% |
| 3481315 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 37.0 | 2.71e-01 | 70.8% | 73.5% |
| 4646939 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.55 | 37.0 | 2.69e-01 | 70.8% | 71.0% |
| 4289812 | 327.11.2.13 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PNO1_2nd | 0.55 | 44.0 | 4.28e-01 | 88.9% | 88.7% |
| 3686916 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.54 | 37.0 | 2.71e-01 | 70.8% | 80.5% |
| 1407164 | 2484.1.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin,Thymosin | 0.54 | 37.0 | 2.70e-01 | 70.8% | 77.2% |
| 4562076 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.54 | 44.0 | 3.93e-01 | 90.3% | 68.6% |
| 4305577 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.53 | 43.0 | 3.92e-01 | 90.3% | 72.0% |
| 3687240 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 36.0 | 2.17e-01 | 70.8% | 10.1% |
| 4335143 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.53 | 43.0 | 3.95e-01 | 90.3% | 75.8% |
| None | — | 0.52 | 42.0 | 3.01e-01 | 88.9% | 33.8% | |
| 3638077 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 43.0 | 3.06e-01 | 97.2% | 98.8% |
| 1283866 | 220.1.1.51 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP3_C | 0.50 | 39.0 | 3.40e-01 | 90.3% | 86.3% |
D2
medium
residues 101-143