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ORF2
Euk-VirBat_Middle_East_Hepe-Astrovirus
ORF2__YP_009480672__Bat_Middle_East_Hepe-Astrovirus__2301732
Identity
- Accession:
- YP_009480672 ↗
- Protein ID:
- ORF2
- Kingdom:
- euk
Quality
59.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 55-136_138-239
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03115.21 best | Astro_capsid_N | 116.9 | 1.40e-33 | 95.7% | 72.3% |
CATH (76)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ewnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.93 | 90.0 | 9.01e-01 | 98.9% | 100.0% |
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.88 | 76.0 | 8.03e-01 | 97.3% | 98.8% |
| 3zxaC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.88 | 75.0 | 7.42e-01 | 97.3% | 84.7% |
| 2ztnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.88 | 85.0 | 8.41e-01 | 100.0% | 98.4% |
| 4rft000 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.88 | 74.0 | 7.90e-01 | 97.8% | 98.2% |
| 4nwvA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.85 | 74.0 | 7.45e-01 | 97.3% | 90.2% |
| 6mrmC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.84 | 73.0 | 7.62e-01 | 96.2% | 97.0% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.84 | 74.0 | 7.51e-01 | 97.8% | 93.8% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.84 | 77.0 | 7.83e-01 | 95.7% | 100.0% |
| 2izwC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 75.0 | 7.14e-01 | 99.5% | 83.2% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.81 | 69.0 | 6.51e-01 | 97.8% | 75.2% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 70.0 | 6.63e-01 | 98.4% | 77.9% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 74.0 | 6.67e-01 | 100.0% | 78.5% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 75.0 | 6.33e-01 | 100.0% | 65.4% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 68.0 | 6.69e-01 | 95.7% | 86.0% |
| 1smvC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 74.0 | 6.89e-01 | 99.5% | 87.4% |
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 73.0 | 6.31e-01 | 100.0% | 77.5% |
| 1c8nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 74.0 | 6.89e-01 | 98.9% | 85.4% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 70.0 | 6.41e-01 | 98.4% | 74.9% |
| 2gh8A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 68.0 | 6.55e-01 | 97.8% | 83.2% |
| 1ihmB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 72.0 | 6.72e-01 | 100.0% | 81.8% |
| 1f2nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 73.0 | 6.95e-01 | 99.5% | 86.8% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 73.0 | 6.20e-01 | 100.0% | 71.6% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 72.0 | 6.34e-01 | 99.5% | 76.9% |
| 1ng0C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 73.0 | 6.83e-01 | 99.5% | 87.2% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 70.0 | 6.54e-01 | 99.5% | 80.9% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 71.0 | 6.67e-01 | 98.4% | 83.9% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 62.0 | 6.28e-01 | 98.4% | 85.8% |
| 1auyB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 62.0 | 6.23e-01 | 100.0% | 84.1% |
| 2y26A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 65.0 | 5.24e-01 | 95.7% | 49.4% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 70.0 | 6.48e-01 | 100.0% | 81.9% |
| 3jb8A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 69.0 | 6.97e-01 | 98.9% | 97.8% |
| 5c8cB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 70.0 | 5.90e-01 | 98.9% | 70.3% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 69.0 | 6.27e-01 | 100.0% | 81.9% |
| 5aca300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 68.0 | 6.33e-01 | 100.0% | 81.1% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 69.0 | 6.22e-01 | 100.0% | 80.6% |
| 1a6cA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 62.0 | 4.96e-01 | 94.0% | 47.1% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 68.0 | 6.23e-01 | 100.0% | 80.0% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 68.0 | 6.25e-01 | 100.0% | 81.3% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.72 | 48.0 | 5.39e-01 | 94.6% | 85.4% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 66.0 | 5.99e-01 | 100.0% | 74.3% |
| 1a6cA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 59.0 | 6.24e-01 | 99.5% | 98.2% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 64.0 | 5.29e-01 | 97.3% | 77.2% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 63.0 | 5.24e-01 | 97.3% | 76.4% |
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 57.0 | 6.01e-01 | 99.5% | 98.8% |
| 4rs5A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 63.0 | 5.91e-01 | 100.0% | 85.1% |
| 4qc8A00 | 2.170.30.10 | Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2 | 0.67 | 62.0 | 4.50e-01 | 100.0% | 94.8% |
| 2df7A02 | 2.60.120.660 | Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus | 0.66 | 49.0 | 5.54e-01 | 94.6% | 100.0% |
| 5jzgA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 58.0 | 5.40e-01 | 100.0% | 76.5% |
| 6f2sH01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 59.0 | 5.57e-01 | 94.6% | 85.6% |
| 1wcdJ01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 59.0 | 5.10e-01 | 97.8% | 71.9% |
| 4lr4A02 | 2.60.120.1430 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 48.0 | 5.06e-01 | 96.2% | 84.5% |
| 3j4uH00 | 2.60.120.1110 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 43.0 | 4.84e-01 | 90.8% | 89.3% |
| 3v10A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 43.0 | 4.74e-01 | 91.3% | 85.6% |
| 1sidF00 | 2.60.175.10 | Mainly Beta › Sandwich › Polyomavirus Vp1; Chain A › Capsid protein VP1,Polyomavirus | 0.61 | 54.0 | 4.32e-01 | 95.1% | 76.3% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.61 | 34.0 | 4.09e-01 | 91.8% | 82.5% |
| 2f1eA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.60 | 35.0 | 4.23e-01 | 95.1% | 87.9% |
| 3napA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 55.0 | 4.86e-01 | 100.0% | 71.2% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 43.0 | 4.88e-01 | 93.5% | 100.0% |
| 5xnrA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 40.0 | 4.71e-01 | 90.2% | 100.0% |
| 3gqcC04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 37.0 | 4.51e-01 | 94.6% | 100.0% |
| 2c4xA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 45.0 | 4.89e-01 | 92.4% | 99.4% |
| 1ex0A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 35.0 | 4.25e-01 | 89.1% | 98.2% |
| 4mbrA02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 40.0 | 4.19e-01 | 91.3% | 82.5% |
| 2orzA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 43.0 | 4.62e-01 | 93.5% | 95.0% |
| 5yotA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 32.0 | 3.83e-01 | 91.3% | 88.9% |
| 1k3iA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 41.0 | 4.41e-01 | 93.5% | 94.8% |
| 5y4mA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 42.0 | 4.56e-01 | 92.9% | 100.0% |
| 1mpxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 45.0 | 4.19e-01 | 93.5% | 94.1% |
| 1o59A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 43.0 | 4.39e-01 | 94.6% | 89.8% |
| 1ju3A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 45.0 | 4.30e-01 | 93.5% | 100.0% |
| 2dmkA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 30.0 | 3.82e-01 | 87.0% | 99.0% |
| 4cvuA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 33.0 | 3.99e-01 | 93.5% | 100.0% |
| 3zyzA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 33.0 | 3.81e-01 | 91.8% | 89.4% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.51 | 36.0 | 4.09e-01 | 92.9% | 100.0% |
| 3iiiA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 45.0 | 4.53e-01 | 94.0% | 98.9% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1877512 | 10.2.1.32 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Astro_capsid_N | 0.92 | 86.0 | 8.67e-01 | 96.7% | 97.8% |
| 1693524 | 10.2.1.49 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN | 0.89 | 75.0 | 7.64e-01 | 97.8% | 88.4% |
| 1724852 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.88 | 76.0 | 8.05e-01 | 97.8% | 98.8% |
| 146646 | 10.2.1.30 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 | 0.88 | 82.0 | 8.10e-01 | 96.7% | 92.7% |
| 2539045 | 10.2.1.12 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Luteo_coat | 0.87 | 65.0 | 7.34e-01 | 96.2% | 96.6% |
| 1693522 | 10.2.1.49 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN | 0.85 | 75.0 | 7.48e-01 | 98.4% | 90.3% |
| 1758310 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.85 | 74.0 | 7.15e-01 | 97.8% | 81.9% |
| 2542980 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.84 | 73.0 | 7.25e-01 | 96.7% | 86.4% |
| 2441244 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.84 | 81.0 | 7.53e-01 | 100.0% | 85.0% |
| 2589532 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.83 | 79.0 | 7.78e-01 | 98.9% | 95.4% |
| 328688 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.83 | 75.0 | 7.14e-01 | 99.5% | 83.2% |
| 2389609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.81 | 77.0 | 6.99e-01 | 100.0% | 78.7% |
| 4882965 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.81 | 56.0 | 6.26e-01 | 92.9% | 88.4% |
| 1400716 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.80 | 70.0 | 6.63e-01 | 98.4% | 77.9% |
| 215519 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.80 | 76.0 | 6.34e-01 | 100.0% | 89.8% |
| 1405130 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.79 | 74.0 | 6.68e-01 | 100.0% | 78.5% |
| 1867996 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.79 | 70.0 | 6.14e-01 | 98.4% | 65.4% |
| 3314257 | 10.32.1.193 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP | 0.78 | 59.0 | 6.04e-01 | 95.7% | 80.6% |
| 2793614 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.78 | 70.0 | 6.60e-01 | 98.9% | 80.4% |
| 289259 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.78 | 74.0 | 6.85e-01 | 99.5% | 86.2% |
| 140024 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 73.0 | 6.31e-01 | 100.0% | 77.5% |
| 1409656 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.78 | 74.0 | 6.89e-01 | 98.9% | 85.4% |
| 1693517 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.78 | 67.0 | 6.53e-01 | 96.7% | 83.0% |
| 4888111 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.78 | 69.0 | 6.86e-01 | 99.5% | 90.5% |
| 3344591 | 10.2.1.81 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP | 0.78 | 58.0 | 5.64e-01 | 95.7% | 69.3% |
| 4872939 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.77 | 71.0 | 6.77e-01 | 100.0% | 85.2% |
| 4814721 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.77 | 70.0 | 6.74e-01 | 100.0% | 86.1% |
| 2099164 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 73.0 | 6.20e-01 | 100.0% | 71.6% |
| 1949031 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 72.0 | 6.34e-01 | 99.5% | 76.9% |
| 1234 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.77 | 73.0 | 7.22e-01 | 99.5% | 99.0% |
| 1232 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.77 | 73.0 | 7.11e-01 | 99.5% | 99.0% |
| 1233 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.77 | 73.0 | 7.25e-01 | 99.5% | 97.4% |
| 2044958 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 72.0 | 6.39e-01 | 100.0% | 76.4% |
| 2099184 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.77 | 72.0 | 6.01e-01 | 100.0% | 76.0% |
| 2099173 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 72.0 | 6.24e-01 | 99.5% | 83.6% |
| 4900996 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.76 | 59.0 | 5.98e-01 | 88.0% | 80.4% |
| 2726763 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 71.0 | 6.12e-01 | 100.0% | 78.9% |
| 1933849 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 70.0 | 6.56e-01 | 100.0% | 81.2% |
| 2100469 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 72.0 | 6.35e-01 | 100.0% | 79.7% |
| 1444532 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.76 | 71.0 | 6.67e-01 | 98.4% | 83.9% |
| 1945727 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 70.0 | 6.24e-01 | 100.0% | 76.1% |
| 296002 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.75 | 62.0 | 6.22e-01 | 100.0% | 84.7% |
| 31171 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.75 | 61.0 | 6.14e-01 | 98.4% | 84.0% |
| 2579094 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.75 | 70.0 | 6.17e-01 | 100.0% | 77.0% |
| 3075118 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 71.0 | 6.19e-01 | 100.0% | 82.8% |
| 139106 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 70.0 | 6.47e-01 | 100.0% | 81.9% |
| 2439648 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 70.0 | 6.04e-01 | 100.0% | 74.4% |
| 4768609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 70.0 | 6.08e-01 | 100.0% | 83.0% |
| 2862065 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.74 | 61.0 | 6.25e-01 | 97.8% | 90.3% |
| 169772 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 69.0 | 6.27e-01 | 100.0% | 81.9% |
| 1219 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.74 | 68.0 | 6.81e-01 | 100.0% | 96.8% |
| 1687952 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 68.0 | 6.33e-01 | 100.0% | 81.1% |
| 1489398 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 68.0 | 6.15e-01 | 100.0% | 77.7% |
| 31099 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 68.0 | 6.25e-01 | 100.0% | 81.3% |
| 1697855 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 66.0 | 5.99e-01 | 100.0% | 74.3% |
| 2983138 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.72 | 67.0 | 6.14e-01 | 100.0% | 80.3% |
| 2414126 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.71 | 66.0 | 5.97e-01 | 100.0% | 75.5% |
| 1866052 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.70 | 59.0 | 5.65e-01 | 100.0% | 77.9% |
| 2099165 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.70 | 64.0 | 5.06e-01 | 97.3% | 67.6% |
| 1886797 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.69 | 64.0 | 5.69e-01 | 98.4% | 75.1% |
| 143450 | 10.2.1.37 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C | 0.69 | 57.0 | 6.01e-01 | 99.5% | 98.8% |
| 3698953 | 10.32.1.3 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III | 0.69 | 47.0 | 5.38e-01 | 92.4% | 92.1% |
| 3605104 | 10.32.1.3 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III | 0.68 | 48.0 | 5.43e-01 | 97.8% | 93.6% |
| 1713715 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.68 | 63.0 | 5.43e-01 | 100.0% | 69.8% |
| 152483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.68 | 63.0 | 5.44e-01 | 100.0% | 70.4% |
| 2710690 | 10.2.1.29 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid | 0.67 | 61.0 | 5.93e-01 | 96.7% | 91.5% |
| 3382082 | 207.1.1.37 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID | 0.57 | 42.0 | 3.31e-01 | 91.8% | 36.6% |
| 3493837 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.55 | 31.0 | 3.64e-01 | 73.4% | 78.4% |
| 3531351 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.55 | 44.0 | 4.06e-01 | 95.7% | 64.6% |
| 3909542 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.54 | 47.0 | 4.57e-01 | 94.6% | 93.3% |
| 1297259 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.54 | 47.0 | 4.37e-01 | 94.0% | 98.7% |
| 4946469 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.53 | 46.0 | 4.51e-01 | 94.6% | 99.5% |
| 4217288 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.53 | 44.0 | 4.52e-01 | 90.2% | 100.0% |
| 3953514 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.52 | 46.0 | 4.49e-01 | 94.0% | 99.5% |
| 3281330 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.52 | 46.0 | 4.13e-01 | 95.1% | 97.3% |
| 3278369 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.52 | 45.0 | 4.18e-01 | 92.9% | 99.1% |
| 1159 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.52 | 45.0 | 4.17e-01 | 92.9% | 96.1% |
| 4944748 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 33.0 | 3.99e-01 | 90.8% | 97.5% |
| 3508294 | 10.32.1.196 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › WLS_GOLD | 0.52 | 44.0 | 4.36e-01 | 90.8% | 100.0% |
| 4319705 | 10.32.1.196 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › WLS_GOLD | 0.52 | 45.0 | 4.43e-01 | 93.5% | 100.0% |
| 5029976 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 33.0 | 3.51e-01 | 89.1% | 70.3% |
| 4289881 | 10.32.1.17 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Allantoicase | 0.51 | 41.0 | 4.42e-01 | 91.8% | 97.5% |
| 4307195 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.51 | 44.0 | 4.17e-01 | 94.0% | 96.9% |
| 3962773 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.50 | 44.0 | 4.29e-01 | 93.5% | 98.0% |
| 3487802 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 43.0 | 4.37e-01 | 92.4% | 99.5% |
| 3553055 | 10.32.1.196 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › WLS_GOLD | 0.50 | 43.0 | 4.34e-01 | 91.8% | 100.0% |
D2
high
residues 242-360
Domain cluster:
rep: capsid_protein__NP_056788__Hepeviridae__291484__D322-442
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ztnA02 | 2.40.30.190 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.76 | 71.0 | 6.66e-01 | 100.0% | 87.9% |
| 2lp6A00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.66 | 47.0 | 5.21e-01 | 100.0% | 96.7% |
| 4ic6C01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 43.0 | 4.52e-01 | 89.1% | 74.5% |
| 5hmaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 39.0 | 4.48e-01 | 89.1% | 85.1% |
| 4o5vA03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.58 | 37.0 | 4.32e-01 | 98.3% | 98.7% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.58 | 42.0 | 4.34e-01 | 89.1% | 81.7% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.57 | 42.0 | 4.59e-01 | 100.0% | 94.8% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.56 | 42.0 | 4.33e-01 | 97.5% | 85.3% |
| 5yzzC00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.56 | 43.0 | 4.45e-01 | 95.0% | 88.3% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.55 | 41.0 | 4.11e-01 | 89.9% | 74.4% |
| 1ztmA02 | 1.10.287.2480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 37.0 | 3.15e-01 | 70.6% | 97.0% |
| 2nr4A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 38.0 | 3.74e-01 | 76.5% | 75.9% |
| 4mmnA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 36.0 | 3.43e-01 | 73.9% | 78.7% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1877513 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 67.0 | 6.66e-01 | 88.2% | 93.6% |
| 397625 | 1.1.13.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › SP2_M | 0.76 | 70.0 | 6.61e-01 | 100.0% | 87.9% |
| 4551806 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.63 | 49.0 | 5.26e-01 | 100.0% | 97.0% |
| 4946268 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 46.0 | 5.01e-01 | 97.5% | 95.8% |
| 3966494 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.61 | 42.0 | 4.41e-01 | 89.9% | 76.4% |
| 2441971 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.58 | 38.0 | 4.34e-01 | 98.3% | 98.7% |
| 2418866 | 1.1.7.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_9 | 0.57 | 49.0 | 5.08e-01 | 100.0% | 99.1% |
| 3705019 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 51.0 | 4.88e-01 | 99.2% | 99.3% |
| 3993856 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.56 | 42.0 | 3.95e-01 | 77.3% | 82.1% |
| 3925903 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.56 | 40.0 | 3.85e-01 | 75.6% | 77.9% |
| 3467248 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 30.0 | 3.56e-01 | 81.5% | 77.2% |
| 3754551 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 49.0 | 4.99e-01 | 100.0% | 97.5% |
| 3811597 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.55 | 40.0 | 4.33e-01 | 98.3% | 93.0% |
| 4014463 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 49.0 | 4.55e-01 | 99.2% | 90.0% |
| 4103763 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.53 | 42.0 | 3.80e-01 | 84.0% | 76.2% |
| 5003841 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 43.0 | 4.45e-01 | 98.3% | 96.4% |
| 3216225 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 31.0 | 3.36e-01 | 79.8% | 69.5% |
| 3710460 | 1.1.7.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th | 0.53 | 43.0 | 4.50e-01 | 100.0% | 97.2% |
| 4026004 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 44.0 | 4.52e-01 | 100.0% | 96.5% |
| 3361133 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.52 | 30.0 | 3.52e-01 | 81.5% | 85.3% |
| 3490032 | 1.1.7.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th | 0.52 | 47.0 | 4.73e-01 | 100.0% | 95.9% |
| 5050226 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.52 | 37.0 | 4.01e-01 | 87.4% | 90.0% |
| 4369944 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.51 | 31.0 | 3.39e-01 | 81.5% | 73.7% |
| 3267479 | 304.9.1.36 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_10 | 0.51 | 33.0 | 3.40e-01 | 84.0% | 69.1% |
| 4034527 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.50 | 29.0 | 3.36e-01 | 79.0% | 82.1% |
| 3376944 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.50 | 31.0 | 3.26e-01 | 81.5% | 67.6% |
| 3496728 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.50 | 29.0 | 3.23e-01 | 81.5% | 72.2% |
D3
high
residues 473-611