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ORF2a
Euk-VirAlphamesonivirus_2
ORF2a__YP_007697631__Alphamesonivirus_2__1945560
Identity
- Accession:
- YP_007697631 ↗
- Protein ID:
- ORF2a
- Kingdom:
- euk
Quality
41.8
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Mesoniviridae›
Alphamesonivirus›
Alphamesonivirus_karangense
TaxID: 1945560
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 252-413
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6a2aA01 | 1.50.10.130 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain | 0.58 | 32.0 | 2.98e-01 | 80.2% | 43.4% |
| 4gf0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 23.0 | 2.75e-01 | 77.2% | 59.3% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.50 | 24.0 | 3.38e-01 | 76.5% | 98.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3350694 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 25.0 | 2.99e-01 | 74.7% | 51.8% |
| 3287582 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.52 | 37.0 | 3.97e-01 | 100.0% | 86.7% |
| 3344274 | 601.20.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipophorin-III › Apolipophorin-III › SMP | 0.51 | 27.0 | 3.07e-01 | 100.0% | 65.6% |
D2
high
residues 825-891
D3
medium
residues 573-649