ORF30

Euk-Vir

Retroperitoneal_fibromatosis-associated_herpesvirus

ORF30__YP_010084394__Retroperitoneal_fibromatosis-associated_herpesvirus__111469

Identity

76.9 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Retroperitoneal_fibromatosis-associated_herpesvirus

TaxID: 111469

View cluster (42 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-54

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03048.20 best	Herpes_UL92	58.6	1.10e-15	100.0%	24.1%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3aslA00	3.30.40.10	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger)	0.56	35.0	3.10e-01	73.9%	35.3%
3cuqA03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	38.0	3.29e-01	78.3%	43.8%
5x9vA01	1.10.560.10	Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain	0.50	38.0	2.55e-01	93.5%	37.1%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5033455	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.76	53.0	5.40e-01	87.0%	75.6%
4978303	375.10.1.0 ↗	few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha	0.55	37.0	3.56e-01	87.0%	58.2%

D2 high residues 85-200

PDB

Domain cluster: rep: E92__YP_007016489__Murid_betaherpesvirus_8__1261657__D111-222

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03048.20 best	Herpes_UL92	132.7	2.00e-38	96.5%	58.1%