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ORF35

Euk-Vir

Callitrichine_gammaherpesvirus_3

ORF35__NP_733888__Callitrichine_gammaherpesvirus_3__106331

Identity

Accession:: NP_733888 ↗
Protein ID:: ORF35
Kingdom:: euk

Quality

80.3 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Lymphocryptovirus› callitrichine_gammaherpesvirus_3

TaxID: 106331

Cluster

View cluster (90 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-78_114-298

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	277.4	3.20e-82	84.9%	22.8%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1td6A02	3.30.1790.10	Alpha Beta › 2-Layer Sandwich › hypothetical protein mp506/mpn330, domain 2 › hypothetical protein mp506/mpn330, domain 2	0.58	22.0	3.29e-01	79.9%	77.2%
1zoyA04	4.10.80.40	Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain	0.50	15.0	2.69e-01	85.4%	84.6%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3594078	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.61	44.0	4.66e-01	88.1%	80.5%
3939461	2004.1.1.135 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1	0.60	45.0	4.52e-01	89.0%	75.6%
4818378	2004.1.1.135 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1	0.59	44.0	4.75e-01	88.6%	87.0%
None	—		0.58	43.0	4.37e-01	88.1%	75.8%
3703483	2004.1.1.135 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1	0.57	44.0	4.31e-01	88.1%	73.2%

D2 high residues 307-376_748-806

PDB

Domain cluster: rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01443.25 best	Viral_helicase1	27.5	3.70e-06	68.2%	28.1%
PF02689.21	Herpes_Helicase	98.6	3.70e-28	55.0%	8.3%
PF02689.21	Herpes_Helicase	87.6	8.00e-25	48.8%	7.2%

D3 high residues 381-456_720-746

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__NP_045354__Bovine_alphaherpesvirus_1__10320__D392-469_736-760

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	85.0	4.80e-24	74.8%	9.7%

D4 medium residues 22-44_79-113

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	50.6	1.20e-13	67.2%	4.3%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3962822	331.3.1.2 ↗	a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A	0.52	33.0	2.64e-01	100.0%	27.4%
4880736	3003.1.1.1 ↗	a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › MCM_N	0.52	41.0	3.23e-01	93.1%	87.5%

D5 medium residues 457-474_643-718

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009137079__Human_alphaherpesvirus_1__10298__D496-518_696-779

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	75.2	4.50e-21	81.9%	9.8%

D6 medium residues 475-537_600-642

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_004940266__Saimiriine_betaherpesvirus_4__1535247__D509-572_638-677

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	47.5	1.00e-12	60.4%	7.4%