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ORF35

Euk-Vir

Bovine_gammaherpesvirus_6

ORF35__YP_009042013__Bovine_gammaherpesvirus_6__1504288

Identity

Accession:
YP_009042013 ↗
Protein ID:
ORF35
Kingdom:
euk

Quality

79.4 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Macavirus› Bovine_gammaherpesvirus_6

TaxID: 1504288

Cluster

View cluster (29 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-111
PDB
Domain cluster: rep: hypothetical_protein_KM711_gp31__YP_010087477__Phascolarctid_gammaherpesvirus_1__2249313__D1-101
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05852.17 best DUF848 84.4 1.30e-23 98.2% 72.4%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1st6A02 1.20.120.810 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle 0.82 59.0 4.51e-01 74.8% 34.7%
4ciuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 60.0 4.88e-01 75.7% 45.8%
1avoB00 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.75 51.0 4.75e-01 73.0% 55.7%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.74 52.0 5.01e-01 72.1% 96.0%
3pltA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.62 54.0 4.34e-01 95.5% 51.9%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3669818 3922.1.1.284 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF29520 0.83 57.0 4.66e-01 73.0% 41.1%
3677853 109.4.1.1529 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3_p135, TPR_12 0.79 44.0 2.62e-01 70.3% 8.0%
3571433 3939.1.1.220 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › KIF21A 0.77 57.0 4.96e-01 76.6% 54.4%
3707236 3291.1.1.16 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Flagellar_rod 0.77 51.0 4.33e-01 77.5% 42.9%
3600887 601.19.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein 0.75 50.0 4.02e-01 76.6% 36.6%
3876221 5.1.12.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains › KIF21A 0.73 53.0 4.74e-01 76.6% 54.2%
3601853 604.7.1.0 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A 0.73 53.0 4.80e-01 74.8% 57.2%
3435097 4177.1.1.11 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › DUF632 0.72 55.0 4.13e-01 80.2% 49.1%
3785883 4177.1.1.97 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PF30147 0.72 53.0 4.39e-01 75.7% 85.4%
3382764 626.1.1.0 ↗ alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) 0.71 57.0 3.46e-01 84.7% 25.1%
3350900 109.4.1.148 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EST1_DNA_bind,EST1 0.70 50.0 3.08e-01 73.9% 23.1%
3249343 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.70 52.0 4.16e-01 79.3% 53.8%
3677974 3939.1.1.207 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › NET2A 0.70 53.0 4.20e-01 80.2% 82.2%
3213934 603.1.1.104 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 0.67 53.0 3.59e-01 82.9% 23.6%
3254670 4177.1.1.2 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.67 48.0 3.80e-01 73.9% 38.7%
3737723 4177.1.1.5 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 0.66 53.0 4.30e-01 86.5% 51.9%
3932320 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.65 54.0 5.00e-01 89.2% 82.9%
4027748 3291.1.1.1 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.64 56.0 5.12e-01 95.5% 91.7%
3567180 4177.1.1.61 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PLC-beta_C 0.64 55.0 4.21e-01 91.9% 96.7%
3235225 4177.1.1.5 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 0.64 52.0 4.16e-01 87.4% 52.7%
3660123 4177.1.1.5 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 0.58 47.0 3.66e-01 88.3% 56.4%
3750625 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 38.0 3.10e-01 72.1% 40.5%