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ORF3
Euk-VirLake_Sinai_Virus_NE
ORF3__YP_009388496__Lake_Sinai_Virus_NE__1983561
Identity
- Accession:
- YP_009388496 ↗
- Protein ID:
- ORF3
- Kingdom:
- euk
Quality
54.0
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Magsaviricetes›
Nodamuvirales›
Sinhaliviridae›
Sinaivirus›
Lake_Sinai_Virus_NE
TaxID: 1983561
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 69-108_223-240_406-494
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.92 | 69.0 | 5.20e-01 | 76.9% | 98.4% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.91 | 69.0 | 5.16e-01 | 76.9% | 99.4% |
| 1wcdJ01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 60.0 | 4.76e-01 | 96.6% | 100.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2099165 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.89 | 67.0 | 4.88e-01 | 77.6% | 87.0% |
| 3022795 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.89 | 78.0 | 5.28e-01 | 91.2% | 90.1% |
| 1114663 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.87 | 77.0 | 5.69e-01 | 91.2% | 97.9% |
D2
medium
residues 109-222
D3
medium
residues 241-261_306-357_387-405
D4
medium
residues 262-305_358-386