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ORF40

Euk-Vir

Callitrichine_gammaherpesvirus_3

ORF40__NP_733893__Callitrichine_gammaherpesvirus_3__106331

Identity

Accession:: NP_733893 ↗
Protein ID:: ORF40
Kingdom:: euk

Quality

52.9 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Lymphocryptovirus› callitrichine_gammaherpesvirus_3

TaxID: 106331

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-105_222-270

PDB

D2 medium residues 106-221

PDB

Domain cluster: rep: JM79__YP_238382__Macaca_fuscata_rhadinovirus__272551__D112-214

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05734.17 best	DUF832	49.3	6.60e-13	100.0%	47.4%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1ax8A00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.65	40.0	3.90e-01	97.4%	54.6%
2iw3A02	1.20.1390.20	Mainly Alpha › Up-down Bundle › PWI domain ›	0.63	39.0	4.37e-01	88.8%	80.0%
3mbdA00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.59	34.0	2.46e-01	80.2%	18.8%
7akwA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.58	49.0	4.05e-01	94.8%	78.8%
8anqA00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.57	44.0	3.66e-01	84.5%	79.9%
4o6mA02	1.20.120.1760	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain	0.57	46.0	3.86e-01	87.1%	79.5%
5figA00	1.20.1270.360	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.56	43.0	4.63e-01	97.4%	95.0%
4c0zA02	1.10.150.480	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 ›	0.56	33.0	3.61e-01	94.8%	70.8%
4wk5A00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.52	42.0	3.42e-01	91.4%	64.5%

ECOD (19)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3407916	633.21.1.0 ↗	alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107	0.61	50.0	4.90e-01	97.4%	80.0%
1713371	633.28.1.1 ↗	alpha bundles › Bromodomain-like › Tsi6 › Tsi6 › Tsi6	0.61	42.0	4.58e-01	97.4%	86.5%
4011174	5041.1.1.0 ↗	extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C	0.60	41.0	4.32e-01	97.4%	77.1%
3852871	605.4.1.14 ↗	alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › Apolipo_F	0.58	42.0	4.46e-01	95.7%	87.0%
4935368	7551.1.1.1 ↗	a/b three-layered sandwiches › ComB-like › ComB-like › ComB-like › 2-ph_phosp	0.56	47.0	3.95e-01	93.1%	82.4%
3686059	5001.1.1.133 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Git3, GPR_Gpa2_C	0.56	48.0	3.60e-01	97.4%	87.6%
4945496	632.1.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain	0.55	34.0	4.14e-01	79.3%	96.0%
3396848	633.10.1.0 ↗	alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like	0.55	49.0	4.84e-01	95.7%	91.1%
3836490	601.4.1.70 ↗	alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › DUF1216	0.55	43.0	3.83e-01	82.8%	95.2%
3282729	1174.1.1.2 ↗	alpha complex topology › Potassium channel TMEM175 › Potassium channel TMEM175 › Potassium channel TMEM175 › LtrA	0.55	44.0	3.74e-01	87.1%	93.7%
3595645	4970.1.1.0 ↗	alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I	0.55	44.0	3.57e-01	97.4%	44.4%
3774408	544.1.1.0 ↗	alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18	0.55	37.0	3.79e-01	99.1%	69.3%
3878144	601.1.2.2 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › I_LWEQ	0.55	50.0	4.72e-01	97.4%	83.7%
3565220	633.23.1.22 ↗	alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL	0.54	49.0	4.51e-01	97.4%	85.5%
3743716	5001.1.1.55 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Git3	0.53	46.0	3.41e-01	96.6%	82.5%
3203654	601.16.1.12 ↗	alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › SH3_1	0.53	39.0	3.36e-01	78.4%	83.0%
5079000	180.1.1.0 ↗	alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase	0.53	45.0	3.93e-01	96.6%	90.5%
4028725	102.1.2.23 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › Stevor	0.53	33.0	3.90e-01	94.8%	92.5%
4029927	1134.1.1.0 ↗	alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain	0.50	34.0	3.70e-01	97.4%	82.0%