←Back to structures
ORF42
Euk-VirBovine_gammaherpesvirus_6
ORF42__YP_009042019__Bovine_gammaherpesvirus_6__1504288
Identity
- Accession:
- YP_009042019 ↗
- Protein ID:
- ORF42
- Kingdom:
- euk
Quality
85.9
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Macavirus›
Bovine_gammaherpesvirus_6
TaxID: 1504288
Cluster
View cluster (70 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 34-146
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01677.23 best | Herpes_UL7 | 117.2 | 1.00e-33 | 97.4% | 64.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3700770 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 27.0 | 3.53e-01 | 95.6% | 78.3% |
| 5022458 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.52 | 33.0 | 3.14e-01 | 95.6% | 55.4% |
| 3183345 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.51 | 32.0 | 2.97e-01 | 91.2% | 48.0% |
| 3600531 | 4012.3.1.0 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 | 0.50 | 24.0 | 3.24e-01 | 87.6% | 94.3% |