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ORF42

Euk-Vir

Felis_catus_gammaherpesvirus_1

ORF42__YP_009173918__Felis_catus_gammaherpesvirus_1__1452540

Identity

Accession:: YP_009173918 ↗
Protein ID:: ORF42
Kingdom:: euk

Quality

87.5 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Percavirus› Felid_gammaherpesvirus_1

TaxID: 1452540

Cluster

View cluster (70 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 27-107_231-268

PDB

Domain cluster: rep: ORF42__YP_009042019__Bovine_gammaherpesvirus_6__1504288__D34-146

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01677.23 best	Herpes_UL7	67.6	1.60e-18	69.8%	45.9%

D2 medium residues 108-230

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01677.23 best	Herpes_UL7	83.3	2.40e-23	83.7%	54.1%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2l6jA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.68	41.0	4.37e-01	74.8%	67.6%
6xu2A01	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.64	45.0	2.89e-01	71.5%	20.0%
1hciA03	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.56	39.0	4.04e-01	72.4%	91.7%
3gt5A00	1.50.10.10	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.56	49.0	3.49e-01	98.4%	67.0%
4kb2A01	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.55	38.0	4.02e-01	70.7%	99.1%
1nktA01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.54	41.0	3.21e-01	81.3%	88.0%
1ui6A00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.52	37.0	3.21e-01	73.2%	49.0%
3tjzB00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.52	44.0	3.40e-01	89.4%	88.6%
5mlc900	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.50	35.0	3.75e-01	72.4%	99.1%

ECOD (20)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3450834	611.3.1.0 ↗	alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	0.74	42.0	4.75e-01	72.4%	72.3%
3392375	650.1.1.1 ↗	alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ	0.73	37.0	4.82e-01	70.7%	87.1%
3709348	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.71	51.0	5.26e-01	73.2%	100.0%
3802014	109.4.1.266 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › XMAP215_CLASP_TOG	0.68	48.0	3.80e-01	72.4%	56.7%
3744774	109.4.1.447 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N	0.68	51.0	3.51e-01	78.9%	44.3%
3610694	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.68	58.0	4.20e-01	91.9%	73.3%
3543063	109.4.1.1805 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EZ, HEAT_GCN1	0.67	50.0	3.88e-01	78.0%	92.7%
3222674	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.65	51.0	4.44e-01	82.1%	83.2%
3555521	109.4.1.1623 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS7_N, INTS7_HB	0.62	52.0	3.18e-01	91.1%	27.5%
3166693	109.1.1.4 ↗	alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › MetRS-N	0.61	43.0	4.70e-01	72.4%	94.0%
4174064	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.60	42.0	4.35e-01	72.4%	90.4%
3353708	109.4.1.329 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CDC14	0.60	44.0	4.89e-01	87.8%	97.9%
3323491	109.4.1.1979 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP72, SRP_TPR_like	0.56	46.0	3.05e-01	90.2%	35.8%
3834324	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.55	47.0	3.39e-01	97.6%	59.5%
4030604	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.55	40.0	3.50e-01	87.0%	50.8%
3989633	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	43.0	3.45e-01	84.6%	57.5%
4992754	7011.1.1.5 ↗	alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › O_anti_polymase	0.53	38.0	2.87e-01	74.0%	62.0%
3713694	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.53	41.0	3.78e-01	82.9%	81.2%
3276432	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.52	44.0	3.00e-01	97.6%	80.8%
4994376	3457.1.1.3 ↗	alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II	0.52	40.0	3.18e-01	80.5%	77.9%