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ORF42
Euk-VirMacaca_nemestrina_rhadinovirus_2
ORF42__YP_010084587__Macaca_nemestrina_rhadinovirus_2__123630
Identity
- Accession:
- YP_010084587 ↗
- Protein ID:
- ORF42
- Kingdom:
- euk
Quality
81.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Rhadinovirus›
Macaca_nemestrina_rhadinovirus_2
TaxID: 123630
Cluster
View cluster (70 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 34-146_235-270
Domain cluster:
rep: JM70__YP_238373__Macaca_fuscata_rhadinovirus__272551__D34-212_233-263
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01677.23 best | Herpes_UL7 | 105.7 | 3.30e-30 | 85.9% | 66.0% |
D2
medium
residues 147-218
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01677.23 best | Herpes_UL7 | 40.9 | 2.40e-10 | 98.6% | 35.0% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2q24A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 46.0 | 3.55e-01 | 100.0% | 82.1% |
| 8e83B01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 41.0 | 2.63e-01 | 88.9% | 77.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3824631 | 109.4.1.2306 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF25999 | 0.66 | 48.0 | 3.25e-01 | 77.8% | 42.5% |
| 4009034 | 2008.1.1.96 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RmuC | 0.62 | 45.0 | 3.32e-01 | 75.0% | 41.1% |
| 4967017 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.60 | 45.0 | 3.91e-01 | 83.3% | 87.5% |
| 4993195 | 632.6.1.15 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › PF26119 | 0.60 | 40.0 | 3.61e-01 | 80.6% | 51.6% |
| 5022771 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.56 | 40.0 | 3.23e-01 | 75.0% | 41.4% |