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ORF43
Euk-VirFelis_catus_gammaherpesvirus_1
ORF43__YP_009173919__Felis_catus_gammaherpesvirus_1__1452540
Identity
- Accession:
- YP_009173919 ↗
- Protein ID:
- ORF43
- Kingdom:
- euk
Quality
76.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Percavirus›
Felid_gammaherpesvirus_1
TaxID: 1452540
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 36-48_240-270_456-502
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 61.1 | 1.00e-16 | 52.8% | 8.4% |
| PF01763.23 | Herpes_UL6 | 45.0 | 7.80e-12 | 47.2% | 5.7% |
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.70 | 44.0 | 5.05e-01 | 79.1% | 88.1% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.70 | 48.0 | 5.39e-01 | 76.9% | 91.5% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 47.0 | 3.62e-01 | 71.4% | 49.5% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 44.0 | 5.16e-01 | 83.5% | 98.4% |
| 7sk7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.67 | 46.0 | 3.30e-01 | 80.2% | 25.7% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 43.0 | 4.35e-01 | 85.7% | 66.3% |
| 2bh8A02 | 6.20.370.20 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.65 | 21.0 | 3.40e-01 | 79.1% | 75.0% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.65 | 56.0 | 4.80e-01 | 93.4% | 93.6% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.64 | 39.0 | 4.21e-01 | 80.2% | 71.4% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 49.0 | 5.03e-01 | 83.5% | 84.1% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 41.0 | 4.57e-01 | 83.5% | 90.6% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 39.0 | 4.52e-01 | 84.6% | 96.6% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 41.0 | 4.74e-01 | 85.7% | 96.8% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 39.0 | 4.50e-01 | 85.7% | 89.2% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 46.0 | 4.96e-01 | 98.9% | 94.7% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 50.0 | 4.20e-01 | 85.7% | 53.1% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 37.0 | 4.47e-01 | 85.7% | 98.2% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.58 | 53.0 | 4.64e-01 | 97.8% | 69.2% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 44.0 | 4.76e-01 | 85.7% | 97.3% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 41.0 | 3.81e-01 | 76.9% | 89.6% |
| 4an8A02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.56 | 45.0 | 4.12e-01 | 87.9% | 77.9% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 35.0 | 3.66e-01 | 83.5% | 69.4% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 42.0 | 3.01e-01 | 81.3% | 82.1% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 39.0 | 3.73e-01 | 75.8% | 82.1% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.52 | 36.0 | 3.88e-01 | 81.3% | 83.3% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.07e-01 | 78.0% | 68.5% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 38.0 | 3.82e-01 | 83.5% | 82.3% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3506175 | 604.18.1.1 ↗ | alpha bundles › Spectrin repeat-like › Triple-helical domain in regulatory ATPase variant A (RavA) › Triple-helical domain in regulatory ATPase variant A (RavA) › ATPase_RavA_C | 0.70 | 44.0 | 5.18e-01 | 82.4% | 95.0% |
| 3089113 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.70 | 50.0 | 5.04e-01 | 84.6% | 73.1% |
| 4931027 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.69 | 49.0 | 3.10e-01 | 84.6% | 15.4% |
| 5001811 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.68 | 49.0 | 4.93e-01 | 73.6% | 80.0% |
| 3410365 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.66 | 53.0 | 3.48e-01 | 86.8% | 26.8% |
| 5045400 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.65 | 46.0 | 3.03e-01 | 83.5% | 17.4% |
| 3376917 | 192.24.1.8 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › CDK5RAP3 | 0.65 | 46.0 | 4.90e-01 | 84.6% | 85.0% |
| 3224170 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.64 | 51.0 | 3.40e-01 | 85.7% | 53.5% |
| 3482669 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.62 | 49.0 | 3.30e-01 | 85.7% | 61.4% |
| 142594 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.62 | 39.0 | 2.54e-01 | 83.5% | 13.6% |
| 4951559 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.62 | 41.0 | 4.47e-01 | 84.6% | 84.0% |
| 3906467 | 1008.1.1.106 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › CSN5_C | 0.61 | 46.0 | 4.70e-01 | 84.6% | 82.2% |
| 4385544 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.61 | 40.0 | 4.37e-01 | 83.5% | 82.7% |
| 4022228 | 109.40.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C | 0.60 | 45.0 | 3.79e-01 | 79.1% | 62.0% |
| 5078048 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.59 | 42.0 | 4.58e-01 | 85.7% | 93.3% |
| 3377936 | 3922.1.1.173 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF3493 | 0.59 | 43.0 | 4.41e-01 | 81.3% | 82.4% |
| 3543042 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.59 | 43.0 | 4.43e-01 | 85.7% | 83.5% |
| 4955309 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.57 | 40.0 | 4.22e-01 | 74.7% | 82.5% |
| 1064799 | 601.46.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Regulatory CZB domain of diguanylate cyclase YdeH › Regulatory CZB domain of diguanylate cyclase YdeH | 0.57 | 49.0 | 4.72e-01 | 93.4% | 94.2% |
| 4363280 | 601.1.2.53 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DGKD_4H | 0.56 | 48.0 | 3.94e-01 | 92.3% | 82.5% |
| 3602796 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.54 | 40.0 | 3.96e-01 | 87.9% | 73.0% |
D2
medium
residues 49-137_519-556
Domain cluster:
rep: UL6__YP_010087410__Vombatid_gammaherpesvirus_1__2052651__D59-122_524-553
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 93.1 | 2.00e-26 | 70.9% | 16.6% |
D3
medium
residues 284-338