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ORF44

Euk-Vir

Ovine_gammaherpesvirus_2

ORF44__YP_438166__Ovine_gammaherpesvirus_2__10398

Identity

Accession:: YP_438166 ↗
Protein ID:: ORF44
Kingdom:: euk

Quality

82.4 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Macavirus› Ovine_gammaherpesvirus_2

TaxID: 10398

Cluster

View cluster (90 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 153-263

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	147.9	4.50e-43	100.0%	13.7%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3lkdB01	1.20.1260.30	Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain	0.57	40.0	3.44e-01	73.0%	83.2%

D2 medium residues 279-333

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	86.6	1.50e-24	100.0%	6.8%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3wqbA02	2.60.120.260	Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like	0.60	37.0	2.68e-01	78.2%	19.3%
2ebnA00	3.20.20.80	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases	0.55	45.0	2.94e-01	98.2%	91.9%
3i3lA02	3.30.390.160	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 ›	0.55	37.0	2.90e-01	70.9%	40.8%
2qrdE01	3.10.580.10	Alpha Beta › Roll › CBS-domain › CBS-domain	0.54	40.0	2.89e-01	87.3%	25.6%
4hadB02	3.30.360.10	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2	0.52	37.0	2.59e-01	74.5%	21.0%
6fezA02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.52	36.0	3.04e-01	89.1%	42.6%
1zoyA04	4.10.80.40	Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain	0.52	42.0	4.06e-01	94.5%	92.3%
1k8kA04	3.90.640.10	Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4	0.51	36.0	3.08e-01	72.7%	43.5%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3212521	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.67	43.0	2.66e-01	78.2%	11.2%
5018200	2004.1.1.220 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2	0.59	38.0	2.21e-01	76.4%	7.0%
4242930	4232.1.1.1 ↗	few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28	0.58	44.0	3.87e-01	87.3%	100.0%
3171046	320.4.1.0 ↗	a+b two layers › R3H domain-like › PUB domain › PUB domain	0.58	38.0	2.76e-01	78.2%	21.1%
3480627	59.1.3.0 ↗	beta complex topology › triple barrel › triple barrel › RNA polymerase I subunits A49/A34.5 dimerization domains	0.55	34.0	3.11e-01	78.2%	41.2%
3995122	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	41.0	2.83e-01	89.1%	28.4%
3649913	5050.1.1.58 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › NFD4_C	0.54	37.0	2.68e-01	78.2%	23.5%
3354637	3357.1.1.2 ↗	extended segments › DCP1-binding motif › DCP1-binding motif › DCP1-binding motif › PH_TRF2_HOY1	0.54	33.0	3.68e-01	90.9%	85.0%
1765248	604.2.1.0 ↗	alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	0.53	42.0	3.13e-01	85.5%	33.8%
5040519	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.52	35.0	2.31e-01	92.7%	14.6%
3199254	604.6.1.41 ↗	alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › DUF846	0.50	37.0	2.88e-01	100.0%	33.3%

D3 medium residues 365-407_757-812

PDB

Domain cluster: rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01443.25 best	Viral_helicase1	23.3	7.20e-05	77.8%	21.1%
PF02689.21	Herpes_Helicase	78.0	6.10e-22	58.6%	6.4%
PF02689.21	Herpes_Helicase	58.2	6.10e-16	44.4%	5.1%

D4 medium residues 408-486_725-756

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__NP_045354__Bovine_alphaherpesvirus_1__10320__D392-469_736-760

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	96.5	1.60e-27	74.8%	10.2%
PF02689.21	Herpes_Helicase	34.0	1.20e-08	28.8%	3.8%

D5 medium residues 487-509_638-689_701-724

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009137079__Human_alphaherpesvirus_1__10298__D496-518_696-779

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	74.6	6.60e-21	79.8%	11.1%

D6 medium residues 510-573_589-637

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_004940266__Saimiriine_betaherpesvirus_4__1535247__D509-572_638-677

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	57.7	8.70e-16	58.4%	7.4%
PF02689.21	Herpes_Helicase	31.6	6.70e-08	49.6%	6.2%