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ORF47b
Euk-VirIctalurid_herpesvirus_2
ORF47b__YP_009447873__Ictalurid_herpesvirus_2__508441
Identity
- Accession:
- YP_009447873 ↗
- Protein ID:
- ORF47b
- Kingdom:
- euk
Quality
34.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Ictavirus›
Ictalurid_herpesvirus_2
TaxID: 508441
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 256-332
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g18I00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.60 | 53.0 | 3.76e-01 | 100.0% | 73.5% |
| 6fdmA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.60 | 36.0 | 3.19e-01 | 98.7% | 40.9% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.58 | 47.0 | 4.56e-01 | 98.7% | 78.4% |
| 3twkA02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 40.0 | 3.28e-01 | 94.8% | 39.6% |
| 4qozC00 | 1.10.8.1120 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Histone RNA hairpin-binding protein RNA-binding domain | 0.52 | 41.0 | 4.19e-01 | 100.0% | 90.4% |
| 5uidA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 43.0 | 3.04e-01 | 94.8% | 75.8% |
| 3b34A03 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.50 | 44.0 | 3.45e-01 | 98.7% | 81.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3895304 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.80 | 56.0 | 4.11e-01 | 72.7% | 28.7% |
| 3598156 | 230.4.1.0 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like | 0.59 | 46.0 | 3.50e-01 | 87.0% | 82.1% |
| 5083436 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 38.0 | 3.31e-01 | 70.1% | 69.6% |
| 4015541 | 4205.1.1.0 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like | 0.53 | 45.0 | 3.34e-01 | 98.7% | 86.9% |
| 3612009 | 230.4.1.1 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like › ApbE | 0.51 | 45.0 | 3.32e-01 | 98.7% | 83.5% |
D2
high
residues 354-418