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ORF49_gene_product

Euk-Vir

Equid_alphaherpesvirus_8

ORF49_gene_product__YP_006273029__Equid_alphaherpesvirus_8__39637

Identity

Accession:
YP_006273029 ↗
Protein ID:
ORF49_gene_product
Kingdom:
euk

Quality

71.3 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Equid_alphaherpesvirus_8

TaxID: 39637

Cluster

View cluster (78 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 198-299_381-406
PDB
Domain cluster: rep: Phosphotransferase__NP_050248__Human_betaherpesvirus_6B__32604__D157-277_344-373
D2 medium residues 300-380_407-423_441-459
PDB
Domain cluster: rep: tegument_serine_threonine_protein_kinase__NP_944427__Psittacid_alphaherpesvirus_1__50294__D194-240_310-345
D3 medium residues 424-440_460-594
PDB
Domain cluster: rep: tegument_serine_threonine_protein_kinase__NP_066843__Gallid_alphaherpesvirus_3__35250__D318-498
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1urjA03 1.10.150.560 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.64 30.0 4.08e-01 75.0% 84.1%
1h0oA00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.61 44.0 3.61e-01 75.0% 84.4%
1paqA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 33.0 3.30e-01 76.3% 54.7%
1aluA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.54 43.0 4.31e-01 86.2% 91.1%
2vkjA00 1.20.58.2030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 27.0 3.18e-01 70.4% 67.0%
1wjtA00 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.51 24.0 2.94e-01 76.3% 67.0%
1e3gA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.50 38.0 3.27e-01 79.6% 92.4%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3549273 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.67 27.0 3.36e-01 71.7% 59.0%
3573660 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.63 26.0 3.52e-01 70.4% 70.6%
3619326 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.62 26.0 3.23e-01 71.1% 62.1%
3482300 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 25.0 3.33e-01 71.1% 70.6%
3253853 109.4.1.1665 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30377 0.55 35.0 2.75e-01 82.2% 28.8%
3234521 188.1.1.1 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.52 40.0 3.33e-01 81.6% 97.1%