Back to structures

ORF4

Euk-Vir

Simian_torque_teno_virus_34

ORF4__YP_009129297__Simian_torque_teno_virus_34__1629657

Identity

Accession:
YP_009129297 ↗
Protein ID:
ORF4
Kingdom:
euk

Quality

61.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 91-140
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cvbA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 44.0 3.10e-01 94.0% 66.8%
4mtdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.66e-01 92.0% 92.0%
3qvjA00 3.40.50.12500 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 39.0 2.65e-01 94.0% 90.6%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.66 44.0 2.56e-01 98.0% 7.5%
4062902 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.64 44.0 2.56e-01 98.0% 7.6%
3817949 224.1.1.2 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.58 48.0 2.88e-01 94.0% 66.4%
3981690 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.57 43.0 3.53e-01 82.0% 52.6%
4056782 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.57 43.0 2.50e-01 84.0% 31.3%
None 0.54 42.0 2.49e-01 88.0% 61.8%
4667949 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.53 40.0 2.53e-01 84.0% 19.3%
None 0.53 41.0 2.49e-01 96.0% 27.4%
4851382 2003.1.1.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.52 43.0 2.76e-01 94.0% 73.4%