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ORF4
Euk-VirSimian_torque_teno_virus_34
ORF4__YP_009129297__Simian_torque_teno_virus_34__1629657
Identity
- Accession:
- YP_009129297 ↗
- Protein ID:
- ORF4
- Kingdom:
- euk
Quality
61.3
mean pLDDT
Taxonomy
Shotokuvirae›
Commensaviricota›
Cardeaviricetes›
Sanitavirales›
Anelloviridae›
Alphatorquevirus›
Simian_torque_teno_virus_34
TaxID: 1629657
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 91-140
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cvbA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 44.0 | 3.10e-01 | 94.0% | 66.8% |
| 4mtdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 44.0 | 3.66e-01 | 92.0% | 92.0% |
| 3qvjA00 | 3.40.50.12500 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 39.0 | 2.65e-01 | 94.0% | 90.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.66 | 44.0 | 2.56e-01 | 98.0% | 7.5% | |
| 4062902 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.64 | 44.0 | 2.56e-01 | 98.0% | 7.6% |
| 3817949 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.58 | 48.0 | 2.88e-01 | 94.0% | 66.4% |
| 3981690 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.57 | 43.0 | 3.53e-01 | 82.0% | 52.6% |
| 4056782 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 43.0 | 2.50e-01 | 84.0% | 31.3% |
| None | — | 0.54 | 42.0 | 2.49e-01 | 88.0% | 61.8% | |
| 4667949 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.53 | 40.0 | 2.53e-01 | 84.0% | 19.3% |
| None | — | 0.53 | 41.0 | 2.49e-01 | 96.0% | 27.4% | |
| 4851382 | 2003.1.1.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 | 0.52 | 43.0 | 2.76e-01 | 94.0% | 73.4% |