ORF4

Euk-Vir

Air_potato_virus_1

ORF4__YP_010085056__Air_potato_virus_1__2491018

Identity

70.0 mean pLDDT

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Ampelovirus› Air_potato_virus_1

TaxID: 2491018

View cluster (3 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-123

PDB

Domain cluster: rep: p60_gene_product__YP_004901690__Grapevine_leafroll-associated_virus_5__71032__D10-123

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2xrfC00	3.40.50.1580	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain	0.62	44.0	3.31e-01	73.9%	86.0%
2ba0A03	3.30.1370.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1	0.54	38.0	4.27e-01	91.3%	100.0%
3cuoD00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	28.0	3.06e-01	72.2%	60.6%
4c1uA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.51	39.0	3.44e-01	85.2%	78.9%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4990536	101.1.9.134 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067	0.66	37.0	4.74e-01	77.4%	98.5%
5016233	223.2.1.0 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like	0.56	41.0	4.26e-01	94.8%	81.5%
3600193	327.19.1.0 ↗	a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain	0.55	36.0	4.22e-01	88.7%	97.4%
3724015	101.1.10.1 ↗	alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N	0.55	38.0	3.62e-01	90.4%	57.9%
3600238	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.54	42.0	2.90e-01	82.6%	55.9%
3602995	223.2.1.5 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7	0.52	39.0	3.97e-01	90.4%	79.1%

D2 medium residues 134-208

PDB

D3 medium residues 209-373

PDB

Domain cluster: representative

D4 medium residues 374-502

PDB

Domain cluster: rep: Hsp90__YP_010086803__Pistachio_ampelovirus_A__2093224__D326-483

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03225.20 best	Viral_Hsp90	58.5	6.90e-16	97.7%	22.7%