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ORF50
Euk-VirHuman_gammaherpesvirus_8
ORF50__YP_001129401__Human_gammaherpesvirus_8__37296
Identity
- Accession:
- YP_001129401 ↗
- Protein ID:
- ORF50
- Kingdom:
- euk
Quality
56.1
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Rhadinovirus›
Human_gammaherpesvirus_8
TaxID: 37296
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-106
D2
medium
residues 107-202
Domain cluster:
rep: ORF50__YP_010084594__Macaca_nemestrina_rhadinovirus_2__123630__D113-208
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03326.19 best | Herpes_TAF50 | 155.8 | 2.70e-45 | 100.0% | 17.7% |
D3
medium
residues 258-336
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03326.19 best | Herpes_TAF50 | 38.2 | 1.20e-09 | 96.2% | 13.5% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1neiA00 | 3.30.160.220 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG | 0.56 | 31.0 | 3.50e-01 | 88.6% | 70.0% |
| 4jneA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.54 | 32.0 | 3.15e-01 | 98.7% | 52.3% |
| 2kdnA00 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.54 | 38.0 | 3.44e-01 | 72.2% | 85.2% |
| 2wxfA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 37.0 | 3.30e-01 | 72.2% | 89.9% |
| 3gxwC00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 41.0 | 3.89e-01 | 88.6% | 95.0% |
| 3n5mB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 42.0 | 3.33e-01 | 91.1% | 55.1% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.50 | 41.0 | 2.64e-01 | 97.5% | 61.4% |
| 4dg8A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.50 | 34.0 | 3.30e-01 | 70.9% | 94.6% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4200200 | 7523.1.1.10 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › HisG | 0.58 | 41.0 | 3.46e-01 | 74.7% | 48.6% |
| 4100594 | 4955.1.1.1 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_7 | 0.57 | 41.0 | 3.69e-01 | 78.5% | 87.5% |
| 3711148 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.56 | 38.0 | 3.42e-01 | 73.4% | 48.3% |
| 4995788 | 3218.1.1.0 ↗ | a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain | 0.54 | 30.0 | 3.56e-01 | 96.2% | 83.0% |
| 4112324 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.53 | 36.0 | 3.10e-01 | 70.9% | 84.6% |
| 3280377 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 37.0 | 3.27e-01 | 78.5% | 64.0% |
| 4190840 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.51 | 34.0 | 3.21e-01 | 70.9% | 91.4% |
| 3769782 | 263.1.1.4 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › PRAS_NT | 0.50 | 26.0 | 2.83e-01 | 100.0% | 54.4% |
| 3290102 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.50 | 36.0 | 3.19e-01 | 75.9% | 89.2% |
| 3955346 | 873.1.1.7 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd | 0.50 | 36.0 | 2.64e-01 | 73.4% | 58.5% |