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ORF52
Euk-VirAlcelaphine_gammaherpesvirus_1
ORF52__NP_065551__Alcelaphine_gammaherpesvirus_1__35252
Identity
- Accession:
- NP_065551 ↗
- Protein ID:
- ORF52
- Kingdom:
- euk
Quality
75.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Macavirus›
Alcelaphine_gammaherpesvirus_1
TaxID: 35252
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 51-100
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05812.18 best | Herpes_BLRF2 | 56.9 | 3.30e-15 | 100.0% | 42.0% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hh0A02 | 6.10.250.360 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.71 | 59.0 | 5.62e-01 | 98.0% | 82.3% |
| 1dkxA02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.67 | 56.0 | 4.79e-01 | 94.0% | 92.5% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.60 | 46.0 | 3.39e-01 | 84.0% | 65.9% |
| 1hw7A02 | 1.10.287.480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › helix hairpin bin | 0.56 | 40.0 | 4.00e-01 | 84.0% | 78.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7704 | 4302.1.1.2 ↗ | a+b duplicates or obligate multimers › BLRF2-like › BLRF2-like › BLRF2-like › Herpes_BLRF2 | 0.93 | 85.0 | 6.96e-01 | 100.0% | 57.5% |
| 3720162 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 53.0 | 3.20e-01 | 88.0% | 29.3% |
| 3603598 | 3896.1.1.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase | 0.65 | 55.0 | 3.78e-01 | 96.0% | 28.9% |
| 4981178 | 321.2.1.0 ↗ | a+b two layers › Glutamine synthetase-like › C-terminal domain in urocanase › C-terminal domain in urocanase | 0.63 | 48.0 | 3.13e-01 | 82.0% | 23.0% |
| 3719622 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.56 | 40.0 | 2.58e-01 | 86.0% | 41.2% |
| 3040602 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.53 | 46.0 | 3.65e-01 | 100.0% | 73.6% |