ORF52

Euk-Vir

Ovine_gammaherpesvirus_2

ORF52__YP_438176__Ovine_gammaherpesvirus_2__10398

Identity

72.2 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Macavirus› Ovine_gammaherpesvirus_2

TaxID: 10398

View cluster (9 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 59-114

PDB

Domain cluster: rep: ORF52__NP_065551__Alcelaphine_gammaherpesvirus_1__35252__D51-100

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05812.18 best	Herpes_BLRF2	27.2	5.10e-06	100.0%	47.1%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2oa5A01	1.10.3390.10	Mainly Alpha › Orthogonal Bundle › YejL-like › YejL-like	0.90	73.0	6.44e-01	85.7%	62.3%
2ql2C00	4.10.280.10	Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain	0.68	50.0	4.96e-01	92.9%	75.9%
3e98B00	3.30.450.40	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain	0.58	46.0	3.35e-01	91.1%	31.6%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7704	4302.1.1.2 ↗	a+b duplicates or obligate multimers › BLRF2-like › BLRF2-like › BLRF2-like › Herpes_BLRF2	0.92	85.0	7.22e-01	100.0%	64.4%
4199523	3121.1.1.13 ↗	a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Spore_II_R	0.82	66.0	5.13e-01	87.5%	48.7%
3347379	3470.1.1.26 ↗	extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › DUF543	0.67	54.0	5.19e-01	89.3%	83.1%
4031490	632.2.1.5 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1542	0.55	44.0	4.11e-01	94.6%	92.0%