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ORF53
Euk-VirFelis_catus_gammaherpesvirus_1
ORF53__YP_009173932__Felis_catus_gammaherpesvirus_1__1452540
Identity
- Accession:
- YP_009173932 ↗
- Protein ID:
- ORF53
- Kingdom:
- euk
Quality
67.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Percavirus›
Felid_gammaherpesvirus_1
TaxID: 1452540
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-15_52-90
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03554.20 best | Herpes_UL73 | 54.3 | 1.50e-14 | 85.2% | 48.1% |
| PF05702.18 | Herpes_UL49_5 | 29.0 | 1.30e-06 | 74.1% | 44.9% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vzbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.79 | 70.0 | 4.91e-01 | 100.0% | 64.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3499207 | 133.1.1.0 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) | 0.96 | 67.0 | 4.25e-01 | 72.2% | 18.3% |
| 3636300 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.81 | 68.0 | 7.07e-01 | 92.6% | 98.0% |
| 3983167 | 3757.1.1.0 ↗ | extended segments › AF1503 pre-HAMP domain › AF1503 pre-HAMP domain › AF1503 pre-HAMP domain | 0.77 | 68.0 | 6.19e-01 | 100.0% | 74.3% |