ORF57

Euk-Vir

Macaca_nemestrina_rhadinovirus_2

ORF57__YP_010084605__Macaca_nemestrina_rhadinovirus_2__123630

Identity

73.2 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Macaca_nemestrina_rhadinovirus_2

TaxID: 123630

View cluster (20 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 216-320_435-447

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05459.19 best	Herpes_UL69	77.5	1.60e-21	82.2%	41.6%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2jbyA00	1.10.437.10	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like	0.62	42.0	4.09e-01	78.0%	63.8%
3vkgB03	1.20.58.1120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4	0.57	46.0	4.20e-01	86.4%	64.7%
5hyhA00	1.10.620.20	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A	0.57	46.0	3.47e-01	86.4%	76.7%
3o26A00	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.54	46.0	3.43e-01	92.4%	88.8%
6vqqA01	1.20.1080.10	Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein.	0.52	42.0	3.33e-01	89.0%	76.6%
1xo0A01	1.10.150.130	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain	0.52	37.0	3.80e-01	73.7%	79.3%
2hsnA02	1.20.1050.110	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.51	33.0	3.50e-01	81.4%	72.0%
3hhcC00	1.20.1250.60	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interferon lambda	0.51	35.0	3.27e-01	100.0%	55.0%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2390527	3977.1.1.1 ↗	alpha duplicates or obligate multimers › ICP27 homology domain › ICP27 homology domain › ICP27 homology domain › Herpes_UL69	0.98	96.0	6.87e-01	100.0%	82.9%
2418879	3977.1.1.1 ↗	alpha duplicates or obligate multimers › ICP27 homology domain › ICP27 homology domain › ICP27 homology domain › Herpes_UL69	0.94	90.0	6.60e-01	100.0%	85.3%
3396860	174.1.1.1 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin	0.61	39.0	3.73e-01	89.0%	54.3%
4972725	3883.1.1.1 ↗	alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf	0.58	41.0	3.50e-01	73.7%	85.1%
3885478	150.1.1.100 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › TMD0_ABC	0.55	45.0	3.87e-01	89.0%	98.5%
3373319	5059.1.1.8 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Mg_trans_NIPA	0.54	42.0	3.71e-01	83.1%	84.4%

D2 medium residues 321-434

PDB

Domain cluster: rep: transcriptional_control_protein__NP_065556__Alcelaphine_gammaherpesvirus_1__35252__D306-423

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05459.19 best	Herpes_UL69	82.0	6.60e-23	100.0%	51.9%