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ORF5

Euk-Vir

Atractylodes_mild_mottle_virus

ORF5__YP_009165750__Atractylodes_mild_mottle_virus__1711685

Identity

Accession:
YP_009165750 ↗
Protein ID:
ORF5
Kingdom:
euk

Quality

82.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-175
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF02160.20 best Peptidase_A3 172.9 9.20e-51 100.0% 70.2%
PF08284.17 RVP_2 27.4 3.60e-06 69.3% 71.3%
PF13975.12 gag-asp_proteas 29.2 1.60e-06 60.0% 88.0%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3s8iA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.83 65.0 7.18e-01 100.0% 97.6%
3slzA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.80 57.0 6.52e-01 80.7% 95.6%
3sqfA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.78 49.0 6.03e-01 72.7% 98.9%
1mvpA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.74 49.0 5.62e-01 70.0% 90.2%
1bxoA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.72 53.0 5.29e-01 75.3% 86.8%
1wkrA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.70 53.0 5.13e-01 78.7% 90.0%
7tbdB02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.67 49.0 4.79e-01 76.0% 84.7%
2vijA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.66 49.0 5.15e-01 76.0% 100.0%
1yg9A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.65 48.0 5.09e-01 75.3% 100.0%
7tbdB01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.64 51.0 4.98e-01 83.3% 92.1%
3igfA02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 23.0 3.21e-01 80.7% 64.9%
2z1cB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 23.0 3.16e-01 100.0% 78.4%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 20.0 2.84e-01 80.0% 76.5%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3436417 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.89 70.0 7.58e-01 82.0% 93.8%
3225435 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.88 56.0 6.49e-01 76.0% 85.8%
3421072 1.1.1.30 beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 0.88 64.0 7.27e-01 76.0% 96.5%
3370298 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.87 62.0 7.26e-01 77.3% 99.1%
4984762 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.87 64.0 7.15e-01 74.7% 95.8%
3427964 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.87 70.0 7.43e-01 83.3% 91.9%
3938624 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.86 64.0 7.26e-01 81.3% 98.3%
3994789 1.1.1.6 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease 0.86 64.0 6.62e-01 76.0% 80.7%
3925981 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.86 57.0 6.71e-01 80.0% 92.7%
3608668 1.1.1.6 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease 0.86 67.0 6.72e-01 84.0% 80.0%
3559341 1.1.1.30 beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 0.86 65.0 6.77e-01 78.0% 90.7%
3883471 1.1.1.30 beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 0.85 65.0 6.97e-01 78.0% 97.7%
3931768 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.85 64.0 6.97e-01 82.7% 92.0%
3496964 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.85 66.0 7.23e-01 83.3% 95.2%
3334785 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.85 66.0 7.13e-01 82.0% 93.1%
3504655 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.85 58.0 6.58e-01 71.3% 89.6%
4436288 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.85 60.0 6.95e-01 80.7% 98.2%
3934729 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.85 65.0 7.16e-01 98.0% 95.2%
3447999 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.84 66.0 7.32e-01 80.7% 100.0%
3868675 1.1.1.6 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease 0.84 68.0 6.49e-01 84.7% 73.5%
3773238 1.1.1.6 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease 0.84 68.0 7.28e-01 83.3% 95.4%
3934130 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.84 67.0 7.25e-01 82.7% 96.2%
3926561 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.84 63.0 7.06e-01 82.7% 96.7%
3735567 1.1.1.6 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease 0.84 67.0 5.69e-01 100.0% 54.7%
5032562 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.84 63.0 7.00e-01 76.7% 97.5%
3925599 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.84 67.0 6.97e-01 82.7% 94.3%
4169805 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.84 59.0 6.83e-01 79.3% 97.3%
3337491 1.1.2.29 beta barrels › cradle loop barrel › RIFT-related › double psi › RVP 0.83 55.0 6.64e-01 77.3% 97.1%
3924493 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.83 51.0 6.46e-01 72.7% 97.9%
3797665 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.83 66.0 6.75e-01 83.3% 84.8%
3923745 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.83 65.0 7.16e-01 82.7% 97.6%
3933581 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.83 59.0 6.87e-01 77.3% 100.0%
3934416 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.82 56.0 6.28e-01 80.7% 87.5%
4969351 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.82 57.0 6.50e-01 71.3% 97.4%
3782336 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.81 68.0 7.29e-01 100.0% 99.2%
3922986 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.81 54.0 6.50e-01 73.3% 100.0%
5031162 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.81 60.0 6.84e-01 78.0% 100.0%
4933012 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.81 61.0 6.79e-01 78.0% 99.2%
3927612 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.81 58.0 6.62e-01 77.3% 96.5%
4992338 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.80 55.0 6.47e-01 72.7% 99.0%
3912599 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.80 62.0 6.91e-01 82.0% 98.3%
5028105 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.80 58.0 6.17e-01 74.7% 88.9%
3937611 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.80 56.0 6.47e-01 71.3% 96.4%
3924552 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.80 59.0 6.52e-01 77.3% 93.3%
4933116 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.80 58.0 6.60e-01 76.7% 97.4%
3939777 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.80 62.0 6.81e-01 82.7% 96.8%
5032197 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.80 57.0 6.53e-01 74.7% 98.2%
4352306 1.1.1.19 beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.80 55.0 6.53e-01 70.0% 100.0%
4964766 1.1.1.5 beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease 0.80 55.0 6.43e-01 81.3% 96.4%
4984547 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.80 58.0 6.45e-01 74.0% 97.5%
5032263 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.80 58.0 6.16e-01 74.0% 95.4%
3249073 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.79 60.0 6.71e-01 81.3% 98.3%
4992554 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.79 58.0 5.87e-01 75.3% 81.9%
3658254 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.79 52.0 6.32e-01 78.7% 100.0%
3366156 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.79 61.0 6.80e-01 80.0% 100.0%
4494100 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.79 57.0 6.12e-01 74.7% 85.9%
4969904 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.79 58.0 6.16e-01 76.7% 85.9%
5032212 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.79 58.0 6.10e-01 75.3% 94.7%
3824511 1.1.1.19 beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.78 56.0 6.24e-01 73.3% 95.0%
3972732 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.78 56.0 5.99e-01 76.7% 84.5%
3932187 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.78 55.0 6.39e-01 80.7% 98.2%
5030771 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.78 57.0 6.44e-01 76.7% 97.4%
3354954 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.78 46.0 5.79e-01 82.0% 96.7%
5073196 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.78 57.0 6.22e-01 74.7% 91.1%
5023444 1.1.1.5 beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease 0.78 56.0 6.44e-01 80.7% 100.0%
3927455 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.78 65.0 6.97e-01 98.0% 100.0%
3262861 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.77 55.0 6.24e-01 78.7% 94.8%
3931849 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.77 58.0 6.29e-01 77.3% 92.0%
3579423 1.1.1.14 beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 0.77 60.0 6.10e-01 81.3% 98.0%
3935794 1.1.1.6 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease 0.77 69.0 7.05e-01 95.3% 97.2%
3691719 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.77 53.0 6.25e-01 78.0% 100.0%
5034399 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.76 57.0 6.02e-01 76.7% 89.5%
5031038 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.76 57.0 6.19e-01 77.3% 98.4%
3929267 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.76 52.0 5.75e-01 80.7% 86.7%
3514088 1.1.1.14 beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 0.76 59.0 6.27e-01 81.3% 94.8%
3509026 1.1.1.14 beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 0.75 59.0 5.69e-01 82.0% 96.5%
3724349 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.75 60.0 6.27e-01 82.7% 97.1%
4993389 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.75 55.0 6.06e-01 77.3% 93.3%
3507687 1.1.1.14 beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 0.75 59.0 6.31e-01 81.3% 98.5%
3793978 1.1.1.14 beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 0.75 59.0 5.73e-01 82.0% 96.4%
3516105 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.74 59.0 6.24e-01 82.0% 97.0%
3506977 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.74 59.0 6.05e-01 82.0% 95.8%
3517572 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.74 54.0 6.17e-01 81.3% 98.3%
D2 high residues 255-320_355-374
PDB
D3 high residues 325-349_382-462
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00078.33 best RVT_1 71.6 1.20e-19 84.9% 41.0%
D4 high residues 464-528
PDB
D5 high residues 542-673
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF17917.8 best RT_RNaseH 90.2 1.20e-25 83.3% 98.1%
PF17919.8 RT_RNaseH_2 62.5 4.50e-17 60.6% 77.0%
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4e19A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.81 73.0 7.34e-01 96.2% 94.0%
3u3gA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.78 72.0 7.08e-01 97.0% 92.9%
1bqnA05 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.77 65.0 6.56e-01 95.5% 89.3%
2ehgA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.77 68.0 6.54e-01 93.9% 85.2%
2hb5A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.72 64.0 6.10e-01 95.5% 82.7%
2qi2A02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.71 49.0 5.22e-01 93.2% 81.6%
4gniA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.70 45.0 5.44e-01 84.8% 98.9%
1atrA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.67 43.0 5.07e-01 85.6% 96.6%
1ig8A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 54.0 5.38e-01 87.9% 98.5%
3d2fA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 42.0 4.86e-01 86.4% 92.5%
1u04A04 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.65 58.0 4.84e-01 97.0% 89.3%
6oziB00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.61 54.0 4.42e-01 95.5% 85.5%
4nspA00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.61 54.0 4.42e-01 95.5% 84.5%
1hkgA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 50.0 5.11e-01 87.9% 98.5%
2w35A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.61 54.0 4.51e-01 95.5% 83.0%
3agkA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.61 49.0 5.02e-01 96.2% 90.3%
3ga2A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.61 54.0 4.45e-01 96.2% 81.4%
4c23B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 51.0 4.24e-01 90.9% 100.0%
5egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 37.0 3.38e-01 100.0% 47.3%
1woqA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 48.0 5.21e-01 87.1% 100.0%
2uytA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 51.0 4.17e-01 89.4% 100.0%
3gocA00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.61 54.0 4.46e-01 96.2% 81.6%
4a2bA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 52.0 5.20e-01 94.7% 92.0%
1u6zA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 46.0 4.76e-01 91.7% 90.8%
7r8iA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.58 53.0 4.47e-01 100.0% 99.5%
3htvA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 46.0 4.97e-01 88.6% 100.0%
3mdqA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 48.0 4.94e-01 92.4% 95.9%
4ienA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 34.0 3.28e-01 100.0% 50.6%
3r9pB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 49.0 4.42e-01 90.9% 93.2%
3aapA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 47.0 4.84e-01 94.7% 94.4%
3cerC01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 47.0 4.77e-01 92.4% 93.0%
4dkwA00 3.30.420.280 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.56 51.0 4.47e-01 100.0% 80.9%
3hi0A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 44.0 4.61e-01 90.2% 94.9%
1t6cA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 46.0 4.70e-01 92.4% 94.4%
2wbnA00 3.30.420.280 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.54 49.0 4.45e-01 100.0% 87.6%
1gkkA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 45.0 3.56e-01 96.2% 84.1%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3366268 2484.1.1.279 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH_2 0.97 54.0 7.46e-01 91.7% 100.0%
4055808 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.94 87.0 8.84e-01 100.0% 97.7%
3270960 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.94 81.0 8.51e-01 94.7% 97.5%
3510735 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.94 87.0 8.70e-01 100.0% 94.1%
3926618 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.94 81.0 8.53e-01 95.5% 97.5%
3937433 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.93 85.0 8.81e-01 100.0% 100.0%
3934190 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.93 85.0 8.77e-01 97.7% 99.2%
3926560 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.93 84.0 8.37e-01 97.7% 91.1%
3923656 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.93 85.0 8.32e-01 99.2% 89.3%
3262383 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.93 84.0 8.41e-01 97.7% 91.9%
3888095 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.93 88.0 8.65e-01 100.0% 92.9%
3933536 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.93 85.0 8.49e-01 98.5% 93.3%
3940091 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.92 85.0 8.33e-01 100.0% 90.0%
3643307 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.92 80.0 8.21e-01 97.0% 94.4%
3927914 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.92 85.0 8.47e-01 100.0% 94.1%
3933233 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.92 86.0 8.69e-01 100.0% 98.5%
3934147 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.91 85.0 8.43e-01 99.2% 94.1%
3507332 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.91 87.0 8.56e-01 100.0% 93.6%
3930361 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.91 82.0 8.49e-01 99.2% 99.2%
3781216 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.91 86.0 8.43e-01 100.0% 92.9%
3933422 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.91 84.0 8.46e-01 100.0% 97.7%
3480829 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.90 83.0 8.56e-01 98.5% 100.0%
3343478 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.90 67.0 7.72e-01 77.3% 100.0%
3934889 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.90 82.0 8.49e-01 97.7% 100.0%
3935434 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.90 80.0 8.14e-01 94.7% 93.1%
3940715 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.90 83.0 8.22e-01 99.2% 93.3%
3934415 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.90 86.0 8.55e-01 100.0% 97.0%
3924791 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.90 84.0 8.50e-01 96.2% 98.5%
3935951 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.90 82.0 8.43e-01 98.5% 100.0%
3924494 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.90 75.0 8.07e-01 90.9% 100.0%
3931383 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.90 83.0 8.38e-01 100.0% 97.7%
3932481 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.89 83.0 8.46e-01 98.5% 98.5%
3783184 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.89 84.0 8.22e-01 99.2% 92.1%
3934033 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.89 79.0 7.89e-01 91.7% 91.9%
3937370 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.89 86.0 8.42e-01 100.0% 97.1%
3251781 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.89 81.0 8.24e-01 96.2% 96.2%
3937613 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.89 83.0 8.27e-01 99.2% 95.6%
3924864 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.88 79.0 8.03e-01 96.2% 95.4%
3930501 2484.5.1.0 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase 0.87 78.0 8.00e-01 97.0% 99.2%
4863301 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.86 75.0 7.95e-01 89.4% 99.2%
3933761 2484.5.1.0 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase 0.86 77.0 7.89e-01 97.0% 99.2%
1905698 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.86 74.0 7.66e-01 96.2% 96.0%
3616473 2484.1.1.99 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.86 81.0 6.98e-01 100.0% 70.3%
4004191 2484.1.1.99 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.85 81.0 6.90e-01 100.0% 69.0%
3923809 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.85 81.0 7.93e-01 100.0% 99.3%
3257339 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.84 75.0 7.72e-01 94.7% 97.6%
3561019 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.84 74.0 7.53e-01 94.7% 93.8%
4530539 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.83 74.0 5.88e-01 94.7% 50.2%
3929265 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.82 74.0 7.34e-01 94.7% 96.3%
3923456 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.82 74.0 6.72e-01 95.5% 85.9%
3933646 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.81 60.0 6.91e-01 88.6% 100.0%
3936714 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.81 77.0 7.41e-01 97.7% 89.0%
3418019 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.80 72.0 6.73e-01 95.5% 78.1%
3843423 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.80 75.0 7.56e-01 99.2% 99.2%
3927366 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.80 69.0 6.64e-01 91.7% 91.3%
2771374 2484.5.1.0 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase 0.80 70.0 7.31e-01 97.0% 100.0%
3845827 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.80 68.0 7.03e-01 88.6% 97.6%
3355790 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.80 71.0 7.07e-01 93.9% 91.8%
3564955 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.79 66.0 7.09e-01 86.4% 100.0%
3803688 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.79 72.0 6.77e-01 96.2% 88.4%
3822302 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.79 71.0 6.92e-01 95.5% 89.7%
3590547 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.79 70.0 7.06e-01 93.9% 93.8%
3808254 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.79 70.0 6.61e-01 96.2% 80.0%
3936603 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.79 70.0 7.13e-01 95.5% 98.5%
3417357 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.78 71.0 6.51e-01 95.5% 75.8%
3940112 2484.5.1.0 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase 0.78 67.0 7.03e-01 91.7% 99.2%
3452368 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.78 71.0 6.29e-01 95.5% 70.0%
3819047 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.78 69.0 6.78e-01 93.2% 92.9%
4969849 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.78 69.0 6.90e-01 93.2% 91.9%
5010128 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.78 69.0 6.65e-01 93.9% 86.5%
4626944 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.78 68.0 6.99e-01 94.7% 96.8%
3828337 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.77 64.0 6.63e-01 87.9% 92.7%
165511 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.77 68.0 6.54e-01 93.9% 85.2%
3929202 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.75 58.0 6.40e-01 98.5% 100.0%
3932764 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.75 67.0 6.47e-01 95.5% 91.0%
2765405 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.74 66.0 6.79e-01 98.5% 98.4%
3903950 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.69 49.0 5.48e-01 81.8% 90.5%
4193378 2484.1.1.5 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1 0.65 54.0 5.25e-01 88.6% 94.5%
3464908 2484.1.1.176 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 0.65 56.0 3.86e-01 93.9% 81.3%
3820555 2484.1.1.5 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1 0.65 56.0 4.53e-01 93.2% 61.3%
3347048 2484.1.1.176 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 0.64 56.0 3.77e-01 94.7% 78.5%
3294153 2484.1.1.5 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1 0.64 52.0 4.41e-01 87.1% 60.0%
3424189 2484.1.1.5 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1 0.64 54.0 4.44e-01 91.7% 59.2%
4666100 2484.1.1.137 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF2114 0.63 58.0 4.44e-01 100.0% 78.0%
4950062 2484.1.1.137 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF2114 0.63 56.0 5.03e-01 97.0% 96.2%
5078933 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.62 56.0 4.73e-01 96.2% 85.7%
4544592 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.62 54.0 5.34e-01 95.5% 88.6%
4548043 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.62 55.0 4.58e-01 95.5% 80.0%
3696317 2484.1.1.15 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 0.61 53.0 4.92e-01 94.7% 91.2%
1807497 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 55.0 4.75e-01 97.0% 93.1%
3337981 2484.1.1.176 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 0.61 54.0 3.88e-01 93.9% 80.3%
4987631 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.61 54.0 4.68e-01 96.2% 88.7%
5069545 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.61 54.0 4.67e-01 96.2% 85.9%
3166896 2484.1.1.10 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.59 52.0 3.73e-01 95.5% 88.5%