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ORF63-like_protein
Euk-VirBufonid_herpesvirus_1
ORF63-like_protein__YP_009552933__Bufonid_herpesvirus_1__2282206
Identity
- Accession:
- YP_009552933 ↗
- Protein ID:
- ORF63-like_protein
- Kingdom:
- euk
Quality
55.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Batravirus›
Bufonid_herpesvirus_1
TaxID: 2282206
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 61-342
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25720.2 best | Herpes_ORF28 | 243.4 | 2.70e-72 | 70.2% | 85.4% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.57 | 23.0 | 3.75e-01 | 85.8% | 99.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032431 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.69 | 37.0 | 4.99e-01 | 85.8% | 95.5% |
| 4292806 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 23.0 | 3.71e-01 | 91.5% | 85.7% |
| 3809348 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 26.0 | 3.78e-01 | 85.5% | 90.0% |
| 3224553 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 25.0 | 3.39e-01 | 75.9% | 77.2% |
| 4254304 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.53 | 29.0 | 3.18e-01 | 70.9% | 61.3% |
D2
medium
residues 1-60
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k32A01 | 2.120.10.60 | Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain | 0.70 | 50.0 | 3.22e-01 | 75.0% | 89.0% |
| 1qhuA01 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.70 | 51.0 | 3.58e-01 | 76.7% | 75.4% |
| 6phxA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.70 | 46.0 | 2.91e-01 | 75.0% | 13.5% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 48.0 | 2.95e-01 | 73.3% | 62.0% |
| 1hxnA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.68 | 49.0 | 3.36e-01 | 76.7% | 78.6% |
| 3lp9A00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.67 | 49.0 | 3.31e-01 | 76.7% | 94.7% |
| 1itvA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.66 | 49.0 | 3.50e-01 | 81.7% | 95.4% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.65 | 43.0 | 3.62e-01 | 75.0% | 41.4% |
| 1w4tA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.65 | 50.0 | 3.58e-01 | 83.3% | 65.2% |
| 1cqaA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.64 | 45.0 | 3.61e-01 | 75.0% | 75.6% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.64 | 51.0 | 3.23e-01 | 88.3% | 91.6% |
| 2o3iA02 | 2.40.390.10 | Mainly Beta › Beta Barrel › CV3147-like › CV3147-like | 0.63 | 45.0 | 3.52e-01 | 75.0% | 48.1% |
| 5tf2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 45.0 | 2.85e-01 | 78.3% | 74.9% |
| 2h0bC00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 47.0 | 3.44e-01 | 86.7% | 95.1% |
| 5h4eA02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.61 | 48.0 | 3.94e-01 | 90.0% | 73.1% |
| 4guzA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.61 | 45.0 | 3.30e-01 | 83.3% | 63.0% |
| 3ottA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 50.0 | 3.21e-01 | 93.3% | 92.6% |
| 3qijB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 40.0 | 3.61e-01 | 75.0% | 78.7% |
| 6hgcA01 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.58 | 46.0 | 3.26e-01 | 88.3% | 84.3% |
| 2jh3A03 | 3.30.1360.190 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.57 | 43.0 | 3.57e-01 | 81.7% | 85.7% |
| 2f2hA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.57 | 41.0 | 2.71e-01 | 76.7% | 26.1% |
| 5z6pA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.56 | 42.0 | 3.02e-01 | 81.7% | 92.7% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 39.0 | 2.98e-01 | 75.0% | 80.1% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 44.0 | 2.93e-01 | 90.0% | 45.7% |
| 1ifqB00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.53 | 36.0 | 2.92e-01 | 71.7% | 64.1% |
| 1m3qA01 | 3.30.310.40 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.53 | 40.0 | 3.72e-01 | 91.7% | 79.8% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.53 | 42.0 | 3.07e-01 | 91.7% | 39.9% |
| 2yj6A02 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.53 | 39.0 | 3.34e-01 | 78.3% | 95.8% |
| 6hoxA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 38.0 | 2.67e-01 | 81.7% | 56.9% |
| 2bolB02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 43.0 | 3.41e-01 | 91.7% | 95.3% |
| 3kxeA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.50 | 41.0 | 3.64e-01 | 95.0% | 80.9% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4019276 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.72 | 51.0 | 3.16e-01 | 75.0% | 45.4% |
| 4950190 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.70 | 47.0 | 3.59e-01 | 70.0% | 92.6% |
| 3497563 | 3468.1.1.0 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain | 0.69 | 49.0 | 3.77e-01 | 75.0% | 85.9% |
| 3814061 | 5.1.3.265 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_FKB95 | 0.69 | 53.0 | 3.29e-01 | 81.7% | 96.5% |
| 3789628 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.68 | 47.0 | 2.93e-01 | 71.7% | 24.4% |
| 3439828 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 51.0 | 3.18e-01 | 80.0% | 87.5% |
| 3484617 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.68 | 49.0 | 3.51e-01 | 75.0% | 68.2% |
| 1916716 | 5.1.4.63 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PorZ_N_b_propeller | 0.68 | 48.0 | 3.05e-01 | 75.0% | 72.7% |
| 4969372 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 51.0 | 2.96e-01 | 81.7% | 45.9% |
| 3677778 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.67 | 49.0 | 3.09e-01 | 76.7% | 78.7% |
| 3910395 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.67 | 49.0 | 3.42e-01 | 78.3% | 80.0% |
| 3418340 | 5.1.5.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N | 0.67 | 47.0 | 2.96e-01 | 75.0% | 52.7% |
| 5039380 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 52.0 | 3.22e-01 | 85.0% | 72.5% |
| 5040209 | 5.1.4.87 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD | 0.65 | 49.0 | 2.95e-01 | 80.0% | 80.2% |
| 3738846 | 633.23.1.12 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Fig1 | 0.65 | 46.0 | 3.21e-01 | 75.0% | 66.0% |
| 3512316 | 5.1.5.69 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nbas_N | 0.65 | 50.0 | 3.13e-01 | 85.0% | 93.3% |
| 3874152 | 5.1.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin | 0.64 | 49.0 | 3.37e-01 | 83.3% | 93.5% |
| 3595721 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.64 | 49.0 | 2.95e-01 | 83.3% | 85.1% |
| 4984268 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.64 | 46.0 | 3.89e-01 | 76.7% | 86.0% |
| 3784139 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.64 | 48.0 | 3.11e-01 | 83.3% | 93.7% |
| 3797427 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 47.0 | 2.97e-01 | 81.7% | 87.8% |
| 3707133 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.63 | 44.0 | 2.98e-01 | 73.3% | 92.9% |
| 3719908 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.62 | 49.0 | 2.98e-01 | 86.7% | 92.5% |
| 3701133 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.62 | 45.0 | 3.12e-01 | 76.7% | 64.8% |
| 2985887 | 5.1.4.271 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 | 0.61 | 48.0 | 2.97e-01 | 85.0% | 66.2% |
| None | — | 0.61 | 48.0 | 2.98e-01 | 85.0% | 55.0% | |
| 3780250 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.61 | 43.0 | 2.78e-01 | 75.0% | 77.2% |
| 3317337 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.60 | 46.0 | 2.83e-01 | 83.3% | 89.9% |
| 4638994 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.60 | 45.0 | 3.68e-01 | 81.7% | 91.3% |
| 4193681 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.58 | 43.0 | 3.66e-01 | 78.3% | 90.9% |
| 4422293 | 4959.1.1.0 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit | 0.58 | 43.0 | 3.37e-01 | 78.3% | 67.7% |
| 3708221 | 633.23.1.23 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin | 0.58 | 46.0 | 3.29e-01 | 85.0% | 75.9% |
| 3665510 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.58 | 47.0 | 2.93e-01 | 88.3% | 85.8% |
| 4032337 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.57 | 42.0 | 3.06e-01 | 78.3% | 40.0% |
| 4005479 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 42.0 | 2.42e-01 | 78.3% | 11.1% |
| 3827261 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 38.0 | 3.02e-01 | 71.7% | 51.5% |
| 3428265 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.57 | 42.0 | 3.30e-01 | 81.7% | 74.8% |
| 3408722 | 633.23.1.20 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Atthog | 0.56 | 39.0 | 2.93e-01 | 75.0% | 66.7% |
| 3445390 | 305.2.1.0 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) | 0.55 | 42.0 | 3.40e-01 | 81.7% | 66.1% |
| 3920719 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.55 | 37.0 | 2.36e-01 | 70.0% | 19.7% |
| 3176337 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 44.0 | 2.72e-01 | 90.0% | 92.8% |
| 4941285 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.53 | 41.0 | 4.02e-01 | 90.0% | 95.7% |
| 5083698 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.53 | 39.0 | 3.88e-01 | 83.3% | 92.3% |
| 5058484 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.52 | 38.0 | 3.69e-01 | 80.0% | 90.0% |
| 5030007 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.52 | 42.0 | 3.92e-01 | 88.3% | 76.0% |
| 4031431 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.50 | 38.0 | 3.77e-01 | 83.3% | 92.3% |
| 4938245 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.50 | 38.0 | 3.61e-01 | 86.7% | 89.3% |