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ORF64
Euk-VirRanid_herpesvirus_2
ORF64__YP_656572__Ranid_herpesvirus_2__389214
Identity
- Accession:
- YP_656572 ↗
- Protein ID:
- ORF64
- Kingdom:
- euk
Quality
61.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Batravirus›
Ranid_herpesvirus_2
TaxID: 389214
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 155-219
Domain cluster:
representative
D2
medium
residues 63-154
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oerA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 49.0 | 4.06e-01 | 87.0% | 70.9% |
| 3ljcA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 39.0 | 3.56e-01 | 75.0% | 46.8% |
| 5y6iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 36.0 | 3.91e-01 | 83.7% | 82.2% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 35.0 | 4.02e-01 | 82.6% | 95.2% |
| 1dnyA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.54 | 35.0 | 3.76e-01 | 78.3% | 77.6% |
| 1sfuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 4.15e-01 | 87.0% | 95.7% |
| 5h5mA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 38.0 | 3.44e-01 | 73.9% | 93.8% |
| 4y66F01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 4.05e-01 | 83.7% | 100.0% |
| 1sg4A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.52 | 44.0 | 3.52e-01 | 97.8% | 52.7% |
| 1ciiA03 | 1.10.490.30 | Mainly Alpha › Orthogonal Bundle › Globin-like › Colicin | 0.52 | 40.0 | 3.45e-01 | 85.9% | 72.0% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 36.0 | 3.79e-01 | 98.9% | 85.9% |
| 2xryA03 | 1.10.579.10 | Mainly Alpha › Orthogonal Bundle › DNA Cyclobutane Dipyrimidine Photolyase, subunit A; domain 3 › DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 | 0.51 | 43.0 | 3.78e-01 | 95.7% | 80.9% |
| 4nrvA02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 37.0 | 3.33e-01 | 81.5% | 69.9% |
| 3pfiA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 32.0 | 3.49e-01 | 82.6% | 80.8% |
| 2cgqA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.50 | 33.0 | 3.59e-01 | 76.1% | 85.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3994572 | 3371.1.1.1 ↗ | few secondary structure elements › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › RPAP2_Rtr1 | 0.62 | 44.0 | 4.08e-01 | 75.0% | 87.5% |
| 3612298 | 3279.1.1.0 ↗ | alpha arrays › Helical domain in 5'->3' exoribonucleases › Helical domain in 5'->3' exoribonucleases › Helical domain in 5'->3' exoribonucleases | 0.59 | 41.0 | 3.10e-01 | 70.7% | 31.2% |
| 166111 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.58 | 37.0 | 3.84e-01 | 73.9% | 69.4% |
| 3954111 | 191.1.1.26 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_24 | 0.56 | 41.0 | 3.80e-01 | 78.3% | 100.0% |
| 3972468 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.54 | 46.0 | 3.52e-01 | 97.8% | 92.1% |
| 3506396 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 36.0 | 3.91e-01 | 84.8% | 86.7% |
| 2070315 | 101.1.2.82 ↗ | alpha arrays › HTH › HTH › winged helix domain › TBPIP | 0.52 | 37.0 | 4.07e-01 | 87.0% | 95.8% |
| 4376064 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 36.0 | 3.99e-01 | 83.7% | 100.0% |