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ORF65
Euk-VirFelis_catus_gammaherpesvirus_1
ORF65__YP_009173945__Felis_catus_gammaherpesvirus_1__1452540
Identity
- Accession:
- YP_009173945 ↗
- Protein ID:
- ORF65
- Kingdom:
- euk
Quality
63.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Percavirus›
Felid_gammaherpesvirus_1
TaxID: 1452540
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-78
Domain cluster:
rep: ORF59__NP_733913__Callitrichine_gammaherpesvirus_3__106331__D15-79
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06112.17 best | Herpes_capsid | 50.2 | 4.60e-13 | 100.0% | 31.4% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fp1B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.80 | 64.0 | 4.54e-01 | 86.2% | 31.7% |
| 3udcA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 61.0 | 4.85e-01 | 84.5% | 48.7% |
| 8eapA01 | 1.20.5.340 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.71 | 54.0 | 5.38e-01 | 81.0% | 88.3% |
| 1zs3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.70 | 54.0 | 3.78e-01 | 82.8% | 27.5% |
| 1ffyA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 54.0 | 3.25e-01 | 86.2% | 85.7% |
| 3fixA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 47.0 | 3.42e-01 | 75.9% | 28.5% |
| 3mpxA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.63 | 53.0 | 3.65e-01 | 94.8% | 26.7% |
| 2kg7B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.62 | 42.0 | 3.67e-01 | 81.0% | 43.3% |
| 7miqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 44.0 | 3.59e-01 | 75.9% | 45.5% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4594465 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.87 | 67.0 | 5.64e-01 | 82.8% | 54.7% |
| 3482354 | 283.1.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 | 0.84 | 52.0 | 3.68e-01 | 70.7% | 22.7% |
| 4999337 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.82 | 56.0 | 4.02e-01 | 70.7% | 53.5% |
| 3725517 | 148.1.1.9 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TFIID_20kDa | 0.82 | 59.0 | 5.26e-01 | 75.9% | 71.2% |
| 3673285 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.81 | 56.0 | 4.54e-01 | 72.4% | 40.0% |
| 3609066 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 56.0 | 4.33e-01 | 74.1% | 36.5% |
| 3224050 | 7579.1.1.58 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF829 | 0.79 | 59.0 | 3.68e-01 | 79.3% | 17.6% |
| 4371240 | 632.7.1.55 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › DUF2605 | 0.78 | 57.0 | 4.78e-01 | 77.6% | 50.5% |
| 5049210 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.75 | 58.0 | 4.53e-01 | 82.8% | 45.0% |
| 3963947 | 3826.1.1.25 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › GlutR_dimer | 0.75 | 58.0 | 5.20e-01 | 82.8% | 63.7% |
| 3244185 | 381.1.1.1 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR | 0.74 | 57.0 | 4.28e-01 | 82.8% | 90.7% |
| 3468013 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.74 | 54.0 | 4.49e-01 | 77.6% | 45.0% |
| 4648753 | 605.1.1.278 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Attractin | 0.73 | 58.0 | 5.84e-01 | 91.4% | 86.7% |
| 5028352 | 103.4.1.30 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF28863 | 0.72 | 51.0 | 4.50e-01 | 75.9% | 83.5% |
| 4211233 | 4120.1.1.60 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › GlutR_dimer | 0.71 | 54.0 | 4.90e-01 | 82.8% | 65.0% |
| 4067677 | 3826.1.1.25 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › GlutR_dimer | 0.70 | 53.0 | 4.83e-01 | 82.8% | 66.7% |
| 5061943 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.69 | 53.0 | 4.15e-01 | 84.5% | 42.4% |
| 4582275 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.67 | 54.0 | 3.60e-01 | 86.2% | 34.5% |
| 4976290 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.66 | 50.0 | 4.47e-01 | 81.0% | 63.7% |
| 4951260 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.65 | 52.0 | 3.96e-01 | 87.9% | 77.9% |
| 4564828 | 4026.1.1.1 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer | 0.65 | 50.0 | 3.65e-01 | 82.8% | 74.2% |
| 3610944 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.61 | 44.0 | 3.57e-01 | 75.9% | 74.0% |