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ORF66

Euk-Vir

Duck_adenovirus_2

ORF66__YP_009047183__Duck_adenovirus_2__1520006

Identity

Accession:
YP_009047183 ↗
Protein ID:
ORF66
Kingdom:
euk

Quality

54.3 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Aviadenovirus› Duck_adenovirus_2

TaxID: 1520006

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-100
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4agsB04 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 40.0 3.62e-01 78.9% 73.7%
4ip8A00 1.10.132.110 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein 0.51 43.0 4.22e-01 100.0% 84.8%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3837390 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 50.0 5.79e-01 87.4% 84.3%
3829820 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 47.0 5.74e-01 77.9% 96.7%
3595717 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 49.0 5.75e-01 92.6% 96.9%
3189083 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.73 51.0 5.65e-01 95.8% 90.7%
4013725 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.71 54.0 5.87e-01 95.8% 95.0%
3380116 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 44.0 5.10e-01 78.9% 88.2%
3324058 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.69 51.0 3.38e-01 77.9% 99.7%
3728200 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 45.0 5.11e-01 100.0% 92.9%
3731690 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.67 51.0 5.54e-01 95.8% 96.2%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 43.0 4.49e-01 84.2% 71.8%
3726236 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.64 50.0 5.32e-01 98.9% 92.9%
3300009 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.64 47.0 5.11e-01 94.7% 91.3%
3738910 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.62 47.0 4.98e-01 91.6% 90.6%
3424086 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.62 51.0 4.12e-01 88.4% 67.4%
3694013 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.61 48.0 4.79e-01 100.0% 80.0%
3652003 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 49.0 3.30e-01 86.3% 99.7%
3275127 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.58 49.0 3.13e-01 90.5% 25.1%
3355293 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.55 46.0 4.61e-01 92.6% 96.0%
3762363 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.54 47.0 2.90e-01 94.7% 96.2%
3397766 109.27.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK 0.53 43.0 3.73e-01 87.4% 64.8%
3193842 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.53 48.0 4.41e-01 100.0% 83.2%
4993526 101.11.1.13 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › EMC6_arch 0.53 36.0 3.78e-01 71.6% 79.5%
3254229 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.51 33.0 3.61e-01 71.6% 82.7%
3697864 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.51 46.0 4.48e-01 100.0% 96.2%