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ORF71

Euk-Vir

Human_gammaherpesvirus_8

ORF71__YP_001129429__Human_gammaherpesvirus_8__37296

Identity

Accession:
YP_001129429 ↗
Protein ID:
ORF71
Kingdom:
euk

Quality

89.3 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Human_gammaherpesvirus_8

TaxID: 37296

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-86
PDB
Domain cluster: rep: JM151__YP_238454__Macaca_fuscata_rhadinovirus__272551__D4-86
D2 high residues 93-171
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01335.28 best DED 55.5 7.80e-15 98.7% 95.1%
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4zbwA01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.93 86.0 7.96e-01 97.5% 82.3%
3cl3A02 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.93 88.0 8.45e-01 100.0% 89.8%
2bbrA02 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.92 87.0 7.91e-01 100.0% 83.0%
4zbwA02 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.88 83.0 7.99e-01 100.0% 92.0%
1n3kA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.86 79.0 6.61e-01 100.0% 62.3%
2bbrA01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.85 71.0 6.86e-01 97.5% 79.8%
2mpcA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.80 73.0 7.00e-01 100.0% 96.7%
2of5H00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.74 67.0 6.19e-01 100.0% 87.0%
2a5yB01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.74 66.0 5.95e-01 100.0% 77.1%
1wmgA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.70 63.0 6.03e-01 100.0% 98.9%
1wxpA01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.68 59.0 5.81e-01 98.7% 100.0%
3qdnA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 37.0 3.68e-01 77.2% 54.8%
3q8gA01 1.10.8.20 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p 0.62 37.0 3.77e-01 86.1% 59.5%
2cr7A01 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.62 45.0 4.82e-01 100.0% 98.4%
2n5hA00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.61 46.0 4.44e-01 86.1% 72.2%
2mn4A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.60 52.0 4.96e-01 100.0% 89.4%
6bmeA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.60 48.0 4.12e-01 87.3% 87.4%
2ppiA01 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.58 37.0 3.41e-01 83.5% 47.2%
3a06B03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.57 39.0 3.79e-01 86.1% 63.6%
2y1eA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.57 38.0 3.75e-01 84.8% 63.2%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 45.0 4.50e-01 100.0% 96.3%
4g1tA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 35.0 3.10e-01 79.7% 46.3%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3922024 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.95 91.0 8.70e-01 100.0% 92.0%
3881146 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.95 90.0 8.19e-01 100.0% 82.0%
4877739 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.95 88.0 7.56e-01 97.5% 68.7%
3917135 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.95 90.0 8.53e-01 100.0% 91.1%
3549820 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.94 89.0 8.24e-01 100.0% 85.3%
3557006 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.93 88.0 8.19e-01 100.0% 84.2%
1159065 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.93 88.0 8.40e-01 100.0% 88.8%
3899612 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.91 85.0 8.07e-01 100.0% 86.7%
2722040 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.90 85.0 7.88e-01 100.0% 85.3%
151659 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.87 80.0 7.62e-01 100.0% 90.0%
3371 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.86 79.0 6.61e-01 100.0% 62.3%
3524319 110.1.1.3 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED 0.85 79.0 7.52e-01 100.0% 92.2%
4082890 110.1.1.1 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death 0.82 77.0 7.17e-01 100.0% 92.6%
3883722 110.1.1.0 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.82 72.0 6.73e-01 94.9% 82.1%
3766354 110.1.1.4 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › PYRIN 0.76 69.0 6.16e-01 100.0% 79.1%
3470938 110.1.1.0 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.75 67.0 6.09e-01 98.7% 99.0%
3857126 110.1.1.1 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death 0.75 68.0 6.18e-01 100.0% 78.1%
3775373 110.1.1.1 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death 0.74 67.0 5.98e-01 100.0% 78.2%
3478660 110.1.1.0 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.74 66.0 6.23e-01 100.0% 98.9%
4913739 110.1.1.1 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death 0.69 60.0 5.88e-01 100.0% 100.0%
3432349 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.64 48.0 4.20e-01 81.0% 89.2%
1684875 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.61 46.0 4.44e-01 86.1% 72.2%
3938137 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.57 46.0 4.32e-01 87.3% 90.5%
3525328 109.4.1.484 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HPS3_C 0.56 39.0 2.99e-01 70.9% 44.0%
4976125 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.56 38.0 3.50e-01 100.0% 53.3%
3197451 103.1.1.3 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N 0.53 36.0 3.86e-01 83.5% 86.2%
2559778 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 36.0 3.03e-01 73.4% 53.5%