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ORF96

Euk-Vir

Ranid_herpesvirus_2

ORF96__YP_656604__Ranid_herpesvirus_2__389214

Identity

Accession:
YP_656604 ↗
Protein ID:
ORF96
Kingdom:
euk

Quality

57.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 97-188
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bayE00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.77 48.0 5.86e-01 70.7% 98.3%
4v3lC00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.74 46.0 5.12e-01 89.1% 82.6%
2lxhC00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.74 42.0 5.12e-01 85.9% 89.7%
2c2vV00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.72 48.0 5.36e-01 79.3% 88.6%
3lrqB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.71 52.0 5.56e-01 77.2% 88.7%
2cklB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.71 49.0 5.44e-01 79.3% 93.0%
3mhsA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.70 48.0 4.28e-01 97.8% 50.4%
1wgmA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.70 47.0 5.18e-01 81.5% 87.7%
2gatA00 3.30.50.10 Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A 0.70 33.0 3.86e-01 76.1% 62.1%
5dinA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.69 48.0 4.38e-01 82.6% 55.0%
2ma6A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.69 42.0 4.92e-01 79.3% 91.8%
3ztgA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.69 49.0 4.94e-01 79.3% 73.9%
2cklA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.69 50.0 4.97e-01 79.3% 72.4%
5trbA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.69 46.0 5.22e-01 78.3% 92.8%
3vk6A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.68 42.0 4.97e-01 80.4% 96.6%
6k2kA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.67 41.0 4.95e-01 93.5% 100.0%
4r7eA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.66 45.0 5.06e-01 76.1% 94.2%
2y43A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.66 49.0 5.03e-01 79.3% 84.1%
4wz0A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.65 52.0 4.89e-01 96.7% 71.6%
1jm7A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.64 45.0 4.43e-01 79.3% 67.0%
5feyA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.63 47.0 5.02e-01 93.5% 93.6%
2yu4A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.62 45.0 4.48e-01 76.1% 76.6%
2fd4A00 3.30.40.110 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › AvrPtoB, C-terminal domain 0.57 48.0 4.67e-01 96.7% 82.9%
1z6uA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.57 50.0 4.67e-01 100.0% 83.5%
2qgpA00 1.10.30.50 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › 0.56 38.0 3.97e-01 72.8% 75.9%
2vp7A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 38.0 4.39e-01 83.7% 98.5%
3aslA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 36.0 4.01e-01 83.7% 98.5%
2miuA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.51 38.0 3.77e-01 78.3% 73.5%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4946420 376.1.1.180 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ResIII 0.80 53.0 6.11e-01 71.7% 95.4%
4991688 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.79 45.0 5.79e-01 78.3% 100.0%
3444000 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.79 51.0 5.92e-01 75.0% 93.8%
3805637 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.78 51.0 5.46e-01 70.7% 77.5%
3392386 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.77 52.0 6.00e-01 82.6% 98.5%
3183646 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.77 49.0 5.13e-01 72.8% 71.1%
3706822 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.76 45.0 5.65e-01 81.5% 100.0%
3998594 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.76 52.0 5.67e-01 79.3% 86.7%
4945028 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.76 50.0 5.50e-01 88.0% 83.8%
3371995 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.75 48.0 4.74e-01 88.0% 62.1%
3499932 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.74 53.0 5.76e-01 82.6% 90.7%
3525671 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.74 47.0 5.53e-01 78.3% 98.3%
3264295 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.74 51.0 5.76e-01 77.2% 94.3%
3848784 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.74 49.0 4.86e-01 82.6% 65.3%
3492481 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.74 53.0 4.99e-01 82.6% 62.7%
4945304 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.74 54.0 5.94e-01 84.8% 93.3%
5076504 376.1.1.183 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Prok-RING_1 0.73 39.0 5.08e-01 73.9% 96.0%
3410722 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.73 47.0 5.62e-01 70.7% 100.0%
4946824 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 4.42e-01 95.7% 35.9%
3315604 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.73 43.0 4.91e-01 80.4% 81.5%
3203296 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.73 51.0 5.62e-01 83.7% 89.3%
5071881 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.73 47.0 5.56e-01 90.2% 100.0%
4970980 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.72 48.0 5.61e-01 70.7% 100.0%
3344003 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.72 47.0 4.96e-01 70.7% 75.0%
3276478 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.72 49.0 5.13e-01 76.1% 76.5%
3608692 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.72 49.0 5.19e-01 89.1% 78.3%
4027994 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.72 47.0 5.43e-01 72.8% 95.4%
5074188 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.72 47.0 5.34e-01 76.1% 89.9%
3638393 376.1.1.27 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.72 54.0 5.94e-01 96.7% 98.7%
3346269 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.72 46.0 4.69e-01 89.1% 66.7%
3722098 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.71 48.0 5.47e-01 73.9% 96.9%
3274573 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.71 47.0 4.62e-01 71.7% 62.0%
3591426 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.71 48.0 5.39e-01 70.7% 91.4%
4977742 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.71 57.0 5.93e-01 94.6% 94.1%
3600248 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.70 49.0 5.12e-01 76.1% 79.8%
3439077 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.70 43.0 4.34e-01 96.7% 60.0%
3439078 376.1.1.5 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.70 43.0 4.62e-01 96.7% 71.2%
3212037 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.70 47.0 5.17e-01 82.6% 90.0%
3730169 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.70 53.0 5.30e-01 87.0% 77.9%
3347446 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.69 46.0 4.42e-01 73.9% 59.0%
4997635 376.1.1.182 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zn_ribbon_3 0.69 53.0 5.63e-01 90.2% 93.8%
3196385 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.69 47.0 5.03e-01 88.0% 81.2%
3818416 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.68 49.0 5.26e-01 95.7% 87.5%
3467876 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.68 45.0 4.44e-01 87.0% 63.0%
3039880 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.68 46.0 5.23e-01 93.5% 98.5%
4022187 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.68 44.0 4.07e-01 96.7% 52.2%
3684414 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.67 49.0 5.16e-01 87.0% 87.5%
4024577 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.67 49.0 5.48e-01 94.6% 100.0%
3354575 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.67 51.0 4.77e-01 81.5% 66.1%
3465532 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.66 46.0 5.12e-01 84.8% 94.3%
3703552 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.66 45.0 4.82e-01 89.1% 81.2%
3185361 376.1.1.5 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.66 42.0 4.09e-01 96.7% 57.1%
3427984 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.66 41.0 4.09e-01 96.7% 60.0%
3214278 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.66 47.0 4.01e-01 75.0% 53.7%
4976747 109.4.1.5 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.65 54.0 3.77e-01 89.1% 60.0%
None 0.65 58.0 4.53e-01 95.7% 95.7%
3239632 376.1.1.27 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.65 48.0 4.95e-01 78.3% 83.5%
3759745 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.65 48.0 4.85e-01 78.3% 86.7%
3263303 376.1.1.70 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Sina_RING 0.64 50.0 4.88e-01 87.0% 77.0%
3601822 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.64 52.0 5.24e-01 96.7% 90.0%
3760419 376.1.1.45 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-NOSIP 0.64 59.0 4.56e-01 100.0% 93.3%
3217012 376.1.1.27 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.64 45.0 3.72e-01 73.9% 45.5%
3196969 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.64 44.0 4.86e-01 70.7% 98.6%
3677066 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.64 45.0 4.84e-01 88.0% 86.3%
3244935 376.1.1.27 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.63 46.0 4.63e-01 78.3% 89.5%
3221216 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.63 46.0 4.51e-01 77.2% 73.0%
3244152 376.1.1.27 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.62 46.0 4.85e-01 79.3% 88.7%
3994024 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 37.0 4.18e-01 87.0% 78.6%
3936791 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.61 48.0 4.96e-01 94.6% 90.6%
3622838 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.61 51.0 5.06e-01 94.6% 87.4%
3696699 376.1.1.125 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2, zf-RING_UBOX 0.61 53.0 4.33e-01 96.7% 81.8%
3194224 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 44.0 4.92e-01 81.5% 100.0%
3421839 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 46.0 4.65e-01 87.0% 82.2%
4102237 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 53.0 5.13e-01 96.7% 93.3%
3397204 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 45.0 4.38e-01 96.7% 73.0%
3260871 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.59 49.0 5.06e-01 94.6% 96.5%
3367616 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.58 50.0 4.65e-01 93.5% 90.4%
3612559 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.58 50.0 4.54e-01 94.6% 76.0%
3172744 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.58 51.0 4.66e-01 95.7% 82.5%
3539528 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.58 50.0 4.93e-01 95.7% 94.9%
3609616 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.57 49.0 4.57e-01 94.6% 98.2%
D2 high residues 241-388
PDB