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ORF9

Euk-Vir

Human_gammaherpesvirus_8

ORF9__YP_001129355__Human_gammaherpesvirus_8__37296

Identity

Accession:: YP_001129355 ↗
Protein ID:: ORF9
Kingdom:: euk

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Human_gammaherpesvirus_8

TaxID: 37296

Cluster

View cluster (158 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-84

PDB

Domain cluster: rep: BALF5__YP_010084701__Lymphocryptovirus_Macaca_pfe-lcl-E3__1716044__D18-75

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4ii2A04	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.52	40.0	2.80e-01	100.0%	68.1%

D2 high residues 290-417_429-531

PDB

Domain cluster: rep: ORF9__YP_438136__Ovine_gammaherpesvirus_2__10398__D341-509

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03104.26 best	DNA_pol_B_exo1	184.5	3.10e-54	69.3%	74.0%

D3 high residues 821-1001

PDB

Domain cluster: rep: DNA_polymerase_catalytic_subunit__NP_073324__Meleagrid_alphaherpesvirus_1__37108__D926-999_1042-1063_1105-1149

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	143.0	1.80e-41	92.3%	33.6%

D4 medium residues 88-151_235-289_532-554

PDB

Domain cluster: rep: DNA_polymerase__YP_010084862__Shrimp_hemocyte_iridescent_virus__2039780__D2-200

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03104.26 best	DNA_pol_B_exo1	38.3	1.40e-09	56.3%	23.5%

D5 medium residues 152-234

PDB

Domain cluster: rep: BALF5__YP_010084701__Lymphocryptovirus_Macaca_pfe-lcl-E3__1716044__D162-229

D6 medium residues 555-741

PDB

Domain cluster: rep: rifcsphigho2_12_scaffold_16_prodigal-single.1__X__X__00427__D428-563_922-933

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	248.9	1.40e-73	99.5%	37.5%

D7 medium residues 742-820

PDB

Domain cluster: rep: DNA_polymerase_catalytic_subunit__YP_002608259__Human_herpesvirus_5__10359__D703-718_902-984

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00136.27 best	DNA_pol_B	96.9	1.80e-27	100.0%	18.3%