←Back to structures
ORFX_protein
Euk-VirCacao_swollen_shoot_Ghana_L_virus
ORFX_protein__YP_009551941__Cacao_swollen_shoot_Ghana_L_virus__2056882
Identity
- Accession:
- YP_009551941 ↗
- Protein ID:
- ORFX_protein
- Kingdom:
- euk
Quality
61.9
mean pLDDT
Taxonomy
Pararnavirae›
Artverviricota›
Revtraviricetes›
Ortervirales›
Caulimoviridae›
Badnavirus›
Cacao_swollen_shoot_Ghana_L_virus
TaxID: 2056882
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-57
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.56 | 39.0 | 3.44e-01 | 73.6% | 55.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588615 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.84 | 55.0 | 4.52e-01 | 75.5% | 40.0% |
| 3516850 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.64 | 55.0 | 3.23e-01 | 100.0% | 14.0% |
| 5059557 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.63 | 43.0 | 2.73e-01 | 71.7% | 64.7% |
| 3389866 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 46.0 | 2.71e-01 | 92.5% | 83.9% |