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ORF_23
Euk-VirAlcelaphine_gammaherpesvirus_1
ORF_23__NP_065522__Alcelaphine_gammaherpesvirus_1__35252
Identity
- Accession:
- NP_065522 ↗
- Protein ID:
- ORF_23
- Kingdom:
- euk
Quality
80.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Macavirus›
Alcelaphine_gammaherpesvirus_1
TaxID: 35252
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-153
Domain cluster:
rep: tegument_protein_UL88__YP_002608280__Human_herpesvirus_5__10359__D21-114_139-191
D2
high
residues 202-301
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04682.18 best | Herpes_BTRF1 | 142.0 | 3.10e-41 | 100.0% | 36.3% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2i53A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 45.0 | 4.45e-01 | 87.0% | 78.4% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 27.0 | 3.89e-01 | 95.0% | 100.0% |
| 1eo0A00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.57 | 31.0 | 3.41e-01 | 80.0% | 64.9% |
| 1dk8A02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.54 | 30.0 | 3.19e-01 | 83.0% | 61.2% |
| 2wsiA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 41.0 | 2.97e-01 | 81.0% | 86.7% |
| 3abbA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 37.0 | 2.53e-01 | 75.0% | 62.9% |
| 2scpA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 40.0 | 3.40e-01 | 86.0% | 99.4% |
| 1t6jA03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.51 | 34.0 | 3.46e-01 | 77.0% | 67.0% |
| 2lwdA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.51 | 39.0 | 4.01e-01 | 83.0% | 92.7% |
| 1d9cA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 37.0 | 3.57e-01 | 79.0% | 82.6% |
| 1ichA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.50 | 39.0 | 4.16e-01 | 89.0% | 97.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979931 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.56 | 43.0 | 4.42e-01 | 94.0% | 85.3% |
| 3754613 | 2004.5.1.15 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › Avl9 | 0.51 | 40.0 | 3.04e-01 | 87.0% | 83.3% |
| 3526937 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 40.0 | 3.65e-01 | 86.0% | 67.9% |
| 3931221 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 39.0 | 3.45e-01 | 87.0% | 64.8% |
D3
high
residues 308-400
Domain cluster:
rep: ORF23__YP_009042002__Bovine_gammaherpesvirus_6__1504288__D308-400
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04682.18 best | Herpes_BTRF1 | 146.3 | 1.60e-42 | 100.0% | 35.9% |