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OV101294.1__CAH0499416.1__PHAGEALMA_118__00118

Bact-Vir

OV101294.1__CAH0499416.1__PHAGEALMA_118__00118

Identity

Accession:
OV101294 ↗
Kingdom:
phage

Quality

59.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-54
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05036.19 best SPOR 23.0 1.10e-04 74.1% 50.0%
CATH (96)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.87 68.0 6.08e-01 83.3% 63.0%
3mczA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.80 63.0 4.03e-01 85.2% 29.3%
1x60A01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.80 72.0 6.53e-01 100.0% 90.3%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.80 60.0 5.39e-01 85.2% 58.7%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.79 68.0 5.66e-01 96.3% 64.2%
4ae5C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.79 61.0 4.32e-01 100.0% 28.5%
1x19A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.78 59.0 4.16e-01 81.5% 29.4%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.78 70.0 4.67e-01 100.0% 27.2%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.78 68.0 5.35e-01 100.0% 47.7%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.78 69.0 5.39e-01 100.0% 51.8%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.78 65.0 5.70e-01 94.4% 62.5%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.75 67.0 4.68e-01 100.0% 33.5%
4iw7A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.75 65.0 5.13e-01 100.0% 80.0%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.75 56.0 5.18e-01 81.5% 64.3%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.74 65.0 5.29e-01 100.0% 55.3%
3c3pA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.74 57.0 3.81e-01 83.3% 23.2%
3tvzB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 63.0 4.72e-01 98.1% 46.7%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.74 55.0 4.60e-01 81.5% 64.9%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 61.0 5.66e-01 98.1% 72.9%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.73 63.0 5.44e-01 98.1% 63.5%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.73 55.0 5.06e-01 100.0% 62.2%
1vi7A02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 60.0 5.53e-01 100.0% 71.8%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.72 55.0 4.37e-01 81.5% 100.0%
4qjvA03 3.30.70.3110 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 55.0 5.25e-01 100.0% 71.0%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 63.0 5.52e-01 100.0% 70.4%
3cjsA00 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.71 53.0 5.26e-01 100.0% 77.6%
2plwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 57.0 3.96e-01 98.1% 26.4%
2ln3A00 3.30.110.140 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.71 55.0 4.82e-01 85.2% 92.8%
4nx9A02 2.60.40.4390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 62.0 4.77e-01 100.0% 72.7%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.71 61.0 5.62e-01 98.1% 76.1%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 61.0 5.29e-01 100.0% 63.5%
4ymhD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 53.0 3.47e-01 83.3% 29.9%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.69 49.0 4.63e-01 77.8% 67.2%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 55.0 5.22e-01 100.0% 77.3%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.68 56.0 5.11e-01 94.4% 74.7%
3douA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 53.0 3.76e-01 96.3% 26.9%
2uv8A06 3.30.70.2490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 54.0 5.06e-01 100.0% 71.6%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 57.0 4.97e-01 100.0% 73.9%
1kn6A00 3.30.70.850 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8, pro-domain 0.67 58.0 5.30e-01 100.0% 80.8%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.67 58.0 4.31e-01 100.0% 37.7%
5gt8D02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.67 55.0 4.27e-01 100.0% 41.0%
1jqgA01 3.30.70.340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like 0.67 54.0 4.69e-01 100.0% 56.0%
3cx5A01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.67 55.0 3.86e-01 100.0% 36.1%
3d7aA01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.67 58.0 4.37e-01 100.0% 69.1%
2ebbA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.67 55.0 4.68e-01 98.1% 61.5%
6baoA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.66 52.0 3.81e-01 85.2% 68.5%
1vqzA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.66 55.0 3.70e-01 100.0% 52.1%
3akjA01 3.30.200.120 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.66 53.0 4.78e-01 88.9% 68.9%
2nykA02 2.60.40.2530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 51.0 4.44e-01 100.0% 54.0%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.65 57.0 5.13e-01 100.0% 82.7%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.65 48.0 4.44e-01 81.5% 64.8%
4r3aA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.65 48.0 3.65e-01 83.3% 59.9%
3ehgA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.65 49.0 3.85e-01 85.2% 62.4%
4erdA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 55.0 4.50e-01 100.0% 50.9%
3oajA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.64 46.0 3.45e-01 85.2% 29.2%
4durB01 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.64 46.0 4.14e-01 79.6% 53.1%
1usmA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.64 53.0 4.83e-01 100.0% 80.5%
3v8hC00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.64 53.0 3.34e-01 94.4% 30.2%
5wm1A02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.64 54.0 4.40e-01 100.0% 57.8%
3h20A02 3.30.70.1790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RepB DNA-primase, N-terminal domain 0.64 53.0 4.42e-01 100.0% 51.5%
2hnkA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 45.0 2.95e-01 74.1% 23.6%
3mtjA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 52.0 4.81e-01 100.0% 72.4%
1zvpD00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.63 52.0 4.09e-01 100.0% 41.2%
4i68A00 3.30.70.1800 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 49.0 4.26e-01 100.0% 54.4%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.63 54.0 4.19e-01 100.0% 80.2%
3eo4D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.63 45.0 3.26e-01 77.8% 46.9%
3g87A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.63 50.0 4.72e-01 100.0% 74.6%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 54.0 4.43e-01 100.0% 53.4%
3juwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 45.0 3.19e-01 77.8% 25.7%
6u9hF02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.62 49.0 4.52e-01 100.0% 66.2%
2bf3B00 3.90.56.10 Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM 0.62 52.0 4.54e-01 98.1% 96.6%
6w72A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 51.0 4.01e-01 100.0% 45.8%
8b6jb01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.61 49.0 3.52e-01 100.0% 37.6%
1wh0A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 53.0 4.28e-01 100.0% 81.1%
1af5A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.61 51.0 4.07e-01 100.0% 47.6%
2g47A03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.61 50.0 3.42e-01 100.0% 77.1%
1q9jB02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.61 51.0 3.60e-01 98.1% 80.6%
4qpkB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.61 44.0 3.43e-01 81.5% 41.0%
3ajdA01 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.60 50.0 4.90e-01 100.0% 86.7%
1x9zA02 3.30.1370.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain 0.60 51.0 4.44e-01 100.0% 60.7%
2xdhA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 51.0 3.84e-01 100.0% 38.4%
4nxyA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 43.0 3.04e-01 77.8% 48.3%
6ofsA03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.59 49.0 3.41e-01 100.0% 84.2%
3ntvA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 40.0 2.77e-01 70.4% 19.0%
4avaA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 46.0 3.31e-01 92.6% 30.6%
2y8yA01 3.30.70.1200 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 0.58 50.0 4.36e-01 100.0% 91.9%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.58 43.0 3.85e-01 83.3% 90.2%
2lfvA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.56 46.0 3.87e-01 100.0% 59.4%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.55 46.0 3.93e-01 98.1% 62.8%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 3.61e-01 88.9% 64.3%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.76e-01 98.1% 61.0%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.44e-01 88.9% 65.3%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.54e-01 92.6% 63.5%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.41e-01 92.6% 61.6%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.44e-01 94.4% 64.8%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 42.0 3.46e-01 98.1% 68.6%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4821456 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.91 64.0 5.94e-01 75.9% 59.7%
5014854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 61.0 3.95e-01 72.2% 18.1%
4978366 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.88 65.0 5.94e-01 77.8% 60.0%
135569 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.87 68.0 6.05e-01 83.3% 62.2%
4981701 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.85 61.0 5.77e-01 75.9% 64.6%
4989805 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.85 66.0 6.05e-01 83.3% 64.3%
4419954 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.85 76.0 7.11e-01 98.1% 90.8%
3950275 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.83 70.0 6.00e-01 92.6% 61.2%
4943246 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.83 75.0 5.99e-01 98.1% 53.0%
3604140 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.83 75.0 5.02e-01 98.1% 28.6%
5023543 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.83 72.0 5.76e-01 98.1% 51.0%
4997606 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.83 74.0 5.21e-01 98.1% 34.2%
3386910 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.82 62.0 5.69e-01 81.5% 62.9%
5065094 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.82 71.0 5.37e-01 100.0% 41.6%
5022297 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.82 74.0 6.01e-01 98.1% 56.8%
3357930 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.82 61.0 5.42e-01 79.6% 57.3%
4993130 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.82 73.0 6.48e-01 98.1% 73.3%
3250910 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.82 61.0 5.56e-01 79.6% 61.4%
4228350 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.82 62.0 5.81e-01 81.5% 67.7%
3581967 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.81 63.0 5.94e-01 83.3% 69.2%
3164039 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.80 73.0 6.52e-01 100.0% 85.1%
4978265 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.80 71.0 5.02e-01 98.1% 34.4%
4990565 304.115.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in DAHP synthase › Ferredoxin-like domain in DAHP synthase 0.80 63.0 6.30e-01 94.4% 83.6%
5080331 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.80 67.0 5.41e-01 94.4% 70.5%
157953 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.80 72.0 6.31e-01 100.0% 82.3%
4217761 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.80 71.0 6.27e-01 100.0% 69.6%
4076311 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.78 70.0 4.93e-01 98.1% 40.0%
4938255 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.78 66.0 5.79e-01 100.0% 63.7%
3403645 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.78 60.0 5.81e-01 83.3% 75.0%
4361828 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.78 64.0 5.18e-01 96.3% 47.6%
4979525 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.78 68.0 4.59e-01 98.1% 32.3%
3308590 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.78 65.0 5.21e-01 96.3% 49.0%
279560 304.115.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in DAHP synthase › Ferredoxin-like domain in DAHP synthase › DAHP_snth_FXD 0.77 65.0 6.01e-01 94.4% 73.5%
3517969 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.77 61.0 5.07e-01 87.0% 49.5%
3879109 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.77 64.0 5.16e-01 96.3% 48.1%
3972855 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.77 69.0 6.18e-01 100.0% 77.3%
3737985 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.77 63.0 5.12e-01 96.3% 49.0%
4121833 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.77 60.0 5.12e-01 85.2% 54.1%
4040528 304.24.1.16 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › PrmA 0.76 65.0 5.54e-01 98.1% 61.1%
4989614 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.76 57.0 5.32e-01 83.3% 64.3%
4932448 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.76 66.0 5.61e-01 100.0% 76.7%
3321720 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.76 62.0 4.92e-01 96.3% 44.5%
3711102 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.76 62.0 5.07e-01 96.3% 49.0%
5028300 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.76 66.0 5.68e-01 98.1% 65.9%
3740807 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.76 63.0 5.42e-01 98.1% 58.8%
4654074 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.76 64.0 5.45e-01 100.0% 57.8%
3595328 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.75 62.0 4.96e-01 96.3% 46.7%
3226102 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.75 62.0 4.98e-01 96.3% 46.3%
3871908 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.75 62.0 4.89e-01 96.3% 44.2%
3603717 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 63.0 5.57e-01 94.4% 68.8%
4608678 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.75 61.0 5.37e-01 96.3% 61.3%
5003842 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.75 58.0 4.01e-01 85.2% 29.1%
4992653 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 64.0 5.91e-01 98.1% 77.1%
3737998 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.74 57.0 4.92e-01 83.3% 55.3%
3838308 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.74 63.0 5.99e-01 100.0% 80.0%
5043746 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.74 62.0 5.66e-01 98.1% 69.3%
3926462 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.74 62.0 5.03e-01 96.3% 48.6%
3262749 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.74 63.0 5.04e-01 94.4% 48.6%
5078855 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.74 61.0 5.53e-01 100.0% 68.0%
4956949 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.74 57.0 5.18e-01 96.3% 62.2%
5010185 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.74 58.0 5.35e-01 94.4% 67.1%
3457072 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.74 62.0 4.60e-01 96.3% 36.4%
3728094 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.74 61.0 4.99e-01 96.3% 50.0%
4385553 304.48.1.48 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 0.73 64.0 4.51e-01 100.0% 40.6%
4964616 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.73 63.0 6.11e-01 98.1% 90.0%
4976695 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.73 59.0 5.11e-01 100.0% 56.7%
3175858 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.73 61.0 4.74e-01 94.4% 43.5%
4946891 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.73 60.0 5.56e-01 100.0% 72.9%
3198781 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.73 63.0 5.46e-01 98.1% 65.9%
5014006 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.72 57.0 4.91e-01 87.0% 64.7%
4999682 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.72 59.0 5.40e-01 100.0% 68.0%
4365938 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.72 62.0 5.40e-01 98.1% 69.4%
5007423 2.1.1.95 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Lig_C 0.72 55.0 4.25e-01 85.2% 36.8%
3602137 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.71 62.0 5.20e-01 100.0% 62.1%
3190610 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.71 60.0 4.77e-01 96.3% 46.4%
3955512 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.71 62.0 4.84e-01 100.0% 53.3%
4012905 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.71 61.0 5.30e-01 98.1% 69.4%
3170274 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.71 61.0 5.15e-01 96.3% 57.8%
5015450 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.71 60.0 5.40e-01 100.0% 70.0%
4282418 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.70 55.0 5.12e-01 100.0% 70.0%
3972097 304.14.1.0 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) 0.70 61.0 5.49e-01 98.1% 86.7%
4992013 304.4.1.80 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF790 0.67 57.0 4.31e-01 100.0% 44.3%
4292464 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.67 58.0 5.16e-01 100.0% 71.2%
4964402 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.67 58.0 5.38e-01 100.0% 78.6%
4937741 210.1.3.4 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.67 58.0 4.05e-01 98.1% 78.3%
5008116 304.24.1.39 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF790 0.67 58.0 4.86e-01 100.0% 63.2%
4934080 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 55.0 4.09e-01 100.0% 37.3%
5049234 2.1.1.374 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2110_C 0.65 54.0 3.86e-01 100.0% 30.9%
3387138 304.110.1.0 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like 0.65 53.0 4.86e-01 100.0% 70.7%
4172994 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.64 52.0 4.57e-01 100.0% 58.8%
4479273 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.64 52.0 4.15e-01 100.0% 51.5%
4974273 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.63 54.0 5.00e-01 100.0% 77.1%
3287739 304.48.1.48 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 0.63 54.0 3.94e-01 100.0% 36.1%
3516321 4012.4.1.1 a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins 0.63 49.0 5.23e-01 85.2% 100.0%
4929225 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.63 51.0 3.89e-01 100.0% 38.7%
4289242 327.19.1.0 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain 0.62 52.0 4.66e-01 100.0% 65.0%
3639594 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 50.0 4.89e-01 96.3% 88.3%
4531300 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.61 51.0 4.53e-01 100.0% 68.2%
4217656 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.60 50.0 4.28e-01 100.0% 56.8%
3740503 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.55 44.0 4.27e-01 100.0% 83.1%
D2 medium residues 55-111
PDB
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2f4lA03 3.10.28.20 Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains 0.78 61.0 5.44e-01 86.0% 87.5%
3gkuA03 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.70 50.0 4.69e-01 82.5% 62.0%
1vw4L01 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.69 52.0 3.94e-01 80.7% 74.1%
4v19R01 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.69 50.0 4.05e-01 78.9% 80.4%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 57.0 4.60e-01 94.7% 50.0%
2vs7A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 59.0 5.29e-01 96.5% 76.9%
5eokA04 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.67 49.0 4.36e-01 78.9% 55.4%
2fphX01 3.30.1370.160 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.66 48.0 4.37e-01 80.7% 58.4%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 52.0 3.92e-01 87.7% 36.7%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 49.0 3.50e-01 80.7% 28.2%
3tm4A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.63 53.0 3.75e-01 98.2% 37.0%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 53.0 4.97e-01 100.0% 79.7%
3wy7D01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 53.0 4.25e-01 100.0% 69.2%
2ywwA01 3.30.70.140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain 0.62 53.0 4.63e-01 100.0% 65.9%
2zfuA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 52.0 3.88e-01 100.0% 37.9%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.61 47.0 4.11e-01 84.2% 55.2%
3lnlB02 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 52.0 4.54e-01 100.0% 72.7%
6h9xA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.60 50.0 3.12e-01 94.7% 87.7%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 49.0 4.57e-01 100.0% 81.0%
3p0tA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.60 51.0 3.94e-01 100.0% 75.0%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.59 53.0 4.50e-01 100.0% 67.7%
6ztgA01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.59 50.0 4.66e-01 98.2% 89.3%
1m1hA01 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.59 49.0 4.19e-01 100.0% 62.0%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.59 50.0 4.46e-01 100.0% 70.6%
3g7uA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 44.0 3.14e-01 82.5% 27.9%
1bixA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.58 45.0 2.91e-01 84.2% 93.5%
2wnyA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.58 47.0 3.77e-01 100.0% 70.8%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 48.0 4.18e-01 100.0% 82.3%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.58 49.0 4.43e-01 100.0% 76.8%
2vjwA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.58 44.0 3.37e-01 84.2% 63.0%
1kcvL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 48.0 4.09e-01 100.0% 82.5%
5xamA02 3.30.70.3220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 49.0 3.57e-01 96.5% 42.9%
5cenA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 43.0 3.90e-01 82.5% 59.0%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 50.0 4.63e-01 100.0% 80.0%
2rhqB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.57 47.0 4.30e-01 100.0% 88.0%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.57 48.0 4.34e-01 100.0% 78.0%
7zqiA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 49.0 4.36e-01 100.0% 84.9%
3k59A02 3.30.70.2250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif 0.57 48.0 4.63e-01 98.2% 88.1%
3b8oA01 3.30.1890.10 Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like 0.57 49.0 3.35e-01 100.0% 53.2%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 47.0 4.26e-01 100.0% 77.1%
3i9fB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 43.0 3.19e-01 89.5% 53.3%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.55 43.0 4.05e-01 94.7% 76.9%
5oj2A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 48.0 4.01e-01 100.0% 82.0%
2jheA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 45.0 4.16e-01 100.0% 74.1%
2y8yA01 3.30.70.1200 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 0.55 47.0 4.15e-01 100.0% 76.7%
5eokA02 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.55 47.0 4.08e-01 98.2% 83.3%
2hw0A00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.54 45.0 3.76e-01 100.0% 55.7%
3hrgA01 3.30.420.250 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain 0.54 38.0 3.02e-01 78.9% 74.8%
1usmA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.54 45.0 4.21e-01 100.0% 85.7%
1ef0B02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 46.0 3.31e-01 100.0% 38.8%
2vfrA03 3.30.70.2530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 43.0 3.90e-01 100.0% 63.2%
1tuwA00 3.30.70.1090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. 0.54 44.0 3.74e-01 100.0% 68.9%
4jn3A01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.53 42.0 3.04e-01 98.2% 74.5%
5eokA03 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.53 46.0 3.93e-01 100.0% 79.4%
4qdgA02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 45.0 3.51e-01 100.0% 54.1%
4ehoB03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.53 39.0 2.88e-01 84.2% 45.8%
2cg4A02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.53 44.0 4.00e-01 100.0% 72.6%
4dzdA01 3.30.70.1200 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 0.52 42.0 4.01e-01 100.0% 80.0%
4ykiA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 39.0 3.07e-01 93.0% 91.2%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3265906 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.72 55.0 4.37e-01 82.5% 42.6%
4139793 218.3.1.1 a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 › Ribosomal_L17 0.70 52.0 3.96e-01 78.9% 66.9%
3427796 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.70 53.0 4.56e-01 82.5% 52.2%
2775555 218.3.1.1 a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 › Ribosomal_L17 0.69 51.0 3.71e-01 78.9% 57.8%
3598932 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.69 52.0 4.25e-01 82.5% 44.8%
4832852 218.3.1.1 a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 › Ribosomal_L17 0.68 50.0 3.81e-01 78.9% 64.4%
4370509 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.68 50.0 4.38e-01 84.2% 52.9%
4027999 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.67 49.0 4.32e-01 82.5% 52.9%
3597859 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.67 57.0 4.56e-01 98.2% 53.3%
4273759 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.67 58.0 4.89e-01 100.0% 65.7%
5065185 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 56.0 4.85e-01 94.7% 63.3%
3963926 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.66 59.0 5.26e-01 98.2% 81.0%
3351908 320.1.1.7 a+b two layers › R3H domain-like › R3H domain › R3H domain › PUS7L_N 0.66 50.0 4.51e-01 82.5% 60.0%
4927106 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.66 58.0 4.99e-01 100.0% 70.0%
3987280 320.1.1.3 a+b two layers › R3H domain-like › R3H domain › R3H domain › YlmH_1st 0.65 48.0 4.20e-01 80.7% 52.9%
3742565 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.65 49.0 3.15e-01 84.2% 18.4%
3838105 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.65 56.0 5.23e-01 94.7% 84.3%
3501365 390.1.1.0 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.65 47.0 4.03e-01 78.9% 48.4%
3415354 390.1.1.0 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.64 48.0 4.17e-01 80.7% 53.3%
3723292 390.1.1.0 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.63 49.0 4.02e-01 89.5% 47.8%
5009548 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.63 45.0 4.13e-01 82.5% 56.2%
4950266 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.63 48.0 3.68e-01 84.2% 37.8%
4943089 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.63 53.0 4.81e-01 100.0% 76.2%
3650979 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.62 53.0 4.44e-01 100.0% 61.0%
3654284 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.62 52.0 4.89e-01 94.7% 84.3%
5058039 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.62 53.0 4.74e-01 100.0% 72.9%
3939040 387.1.5.0 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.62 43.0 4.68e-01 73.7% 100.0%
4014672 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.62 52.0 3.95e-01 100.0% 44.7%
3655963 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 53.0 4.99e-01 100.0% 88.6%
4174854 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.61 52.0 4.87e-01 100.0% 90.7%
4490258 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.61 53.0 3.25e-01 100.0% 17.8%
3823393 320.1.1.3 a+b two layers › R3H domain-like › R3H domain › R3H domain › YlmH_1st 0.61 46.0 4.26e-01 82.5% 62.7%
4943823 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.61 51.0 4.70e-01 100.0% 83.7%
4682574 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.60 51.0 4.50e-01 100.0% 74.4%
5000612 304.19.1.0 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain 0.60 50.0 4.79e-01 100.0% 91.4%
3773589 304.161.1.2 a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in TMEM16 lipid scramblase › Alpha-beta plait domain in TMEM16 lipid scramblase › Anoct_dimer 0.60 51.0 3.76e-01 100.0% 81.2%
3858621 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.59 49.0 4.54e-01 100.0% 83.7%
4248896 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.59 41.0 4.05e-01 78.9% 67.7%
5074728 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.59 49.0 4.53e-01 100.0% 85.0%
3641084 387.1.5.31 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › PF29352 0.59 44.0 4.54e-01 84.2% 100.0%
3596489 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.59 49.0 3.96e-01 100.0% 52.8%
3781123 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 50.0 4.24e-01 100.0% 77.0%
4129075 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.59 50.0 4.44e-01 98.2% 92.9%
2723611 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.59 51.0 4.32e-01 100.0% 58.8%
4220559 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.59 51.0 4.63e-01 100.0% 83.7%
4929386 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 50.0 4.25e-01 100.0% 59.0%
4403865 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.58 49.0 4.18e-01 100.0% 80.0%
3831436 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.58 43.0 3.91e-01 80.7% 61.3%
4063927 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.58 49.0 3.49e-01 100.0% 33.2%
5076573 304.43.1.0 a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 0.58 50.0 4.52e-01 100.0% 83.7%
3839747 7523.1.1.3 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 0.58 42.0 2.98e-01 80.7% 78.5%
5056577 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.58 51.0 4.67e-01 100.0% 84.0%
3659690 387.1.5.31 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › PF29352 0.58 44.0 4.65e-01 84.2% 100.0%
4440042 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.57 49.0 4.47e-01 100.0% 83.7%
3784881 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.57 48.0 4.17e-01 100.0% 65.3%
4360331 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.57 48.0 4.49e-01 100.0% 76.0%
5039654 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.57 48.0 4.38e-01 100.0% 72.5%
4545114 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.57 49.0 4.46e-01 100.0% 83.7%
3602520 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.57 47.0 4.39e-01 100.0% 82.7%
4092153 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.57 47.0 4.20e-01 100.0% 75.6%
3438053 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 47.0 4.41e-01 100.0% 85.3%
4217144 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.56 48.0 4.34e-01 100.0% 83.7%
4131480 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.56 48.0 4.35e-01 100.0% 83.7%
5053080 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.56 46.0 4.21e-01 100.0% 81.9%
4990220 304.4.1.20 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 0.55 47.0 3.89e-01 100.0% 52.7%
4054258 2484.1.1.47 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › T2SSL 0.55 38.0 3.06e-01 78.9% 39.3%
3430598 387.1.5.31 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › PF29352 0.55 39.0 4.10e-01 78.9% 92.0%
4878007 101.1.2.9 alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV 0.53 43.0 3.40e-01 100.0% 49.3%
4496232 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.53 43.0 4.00e-01 100.0% 83.7%
1297469 11.1.4.15 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa2 0.53 44.0 3.33e-01 100.0% 60.9%
4929771 304.151.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase 0.53 43.0 3.93e-01 100.0% 81.0%
4937853 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.52 45.0 4.25e-01 100.0% 87.1%
4021490 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.52 43.0 3.96e-01 100.0% 76.2%
3362483 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.52 42.0 3.95e-01 98.2% 72.9%
5049483 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.51 43.0 3.79e-01 100.0% 67.8%
4148442 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.51 42.0 3.94e-01 100.0% 77.3%