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OX241434.1__CAH9012042.1__VP168E361_P0030__00030

Bact-Vir

OX241434.1__CAH9012042.1__VP168E361_P0030__00030

Identity

Accession:
OX241434 ↗
Kingdom:
phage

Quality

75.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-98
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o5nA02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.68 47.0 3.98e-01 71.1% 73.9%
2gzaA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.67 52.0 5.02e-01 81.4% 94.4%
1ynjJ02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.63 34.0 4.03e-01 71.1% 79.0%
1p9rA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.62 49.0 4.75e-01 86.6% 79.3%
5tjjB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.61 42.0 3.45e-01 71.1% 86.5%
1h54A03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.61 33.0 3.73e-01 87.6% 70.3%
3wirA03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.59 32.0 3.77e-01 88.7% 75.4%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.58 48.0 4.75e-01 90.7% 91.3%
1s14B00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.57 44.0 3.67e-01 84.5% 86.5%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 31.0 3.67e-01 70.1% 82.0%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.56 46.0 3.87e-01 88.7% 97.6%
1b9mB02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 35.0 3.98e-01 84.5% 84.7%
2gk4A00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.56 30.0 2.30e-01 85.6% 21.4%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 3.99e-01 100.0% 99.0%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 47.0 3.52e-01 92.8% 72.2%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 43.0 4.13e-01 83.5% 95.6%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 47.0 3.53e-01 92.8% 72.3%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 46.0 3.66e-01 91.8% 78.4%
3cpxA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.55 28.0 3.29e-01 95.9% 71.0%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.54 45.0 3.62e-01 90.7% 77.7%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.71e-01 99.0% 98.1%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 45.0 3.37e-01 93.8% 72.1%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 45.0 3.39e-01 94.8% 73.3%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 43.0 3.27e-01 93.8% 72.8%
3cwvA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 44.0 3.49e-01 92.8% 60.1%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 44.0 3.32e-01 94.8% 73.5%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 35.0 3.62e-01 70.1% 75.8%
3kl9A02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.51 31.0 3.50e-01 97.9% 79.7%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 45.0 3.31e-01 99.0% 51.3%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.51 43.0 4.04e-01 92.8% 95.0%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.51 45.0 4.12e-01 96.9% 91.9%
1aj6A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.51 39.0 3.22e-01 85.6% 84.0%
2r16A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 3.57e-01 94.8% 72.0%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.50 38.0 3.61e-01 100.0% 68.4%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2337265 12.3.1.33 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PcRGLX_2nd 0.65 58.0 3.92e-01 100.0% 44.0%
5014589 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.63 47.0 3.25e-01 79.4% 51.2%
4932458 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 49.0 3.44e-01 83.5% 54.6%
4933961 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.62 47.0 3.15e-01 81.4% 27.2%
4993459 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.60 49.0 3.89e-01 87.6% 73.8%
3989004 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.59 48.0 3.45e-01 89.7% 29.7%
5052238 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.59 50.0 3.86e-01 89.7% 71.2%
5078927 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.58 48.0 3.74e-01 86.6% 71.8%
5072620 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.58 48.0 3.73e-01 88.7% 69.5%
3970776 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.58 49.0 3.79e-01 90.7% 66.7%
3971508 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.58 47.0 3.80e-01 88.7% 71.1%
4974431 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.58 47.0 3.68e-01 86.6% 70.3%
3971167 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.57 47.0 3.67e-01 88.7% 68.3%
1924009 227.1.1.10 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_PAP 0.57 43.0 3.94e-01 81.4% 83.5%
3175837 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 31.0 2.73e-01 84.5% 34.0%
4944133 512.1.1.5 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_3rd 0.56 47.0 3.71e-01 88.7% 71.1%
3244229 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.56 49.0 4.55e-01 96.9% 81.6%
5015502 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.56 47.0 3.74e-01 90.7% 71.8%
1114935 2008.1.1.27 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.56 50.0 3.46e-01 99.0% 98.5%
5032188 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.56 47.0 3.68e-01 89.7% 71.3%
3406312 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.55 48.0 4.46e-01 94.8% 97.6%
5073568 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.55 49.0 3.78e-01 94.8% 72.2%
4932227 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.55 47.0 3.72e-01 90.7% 72.1%
3789625 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.55 48.0 4.36e-01 96.9% 81.5%
3625037 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.55 48.0 4.35e-01 96.9% 81.5%
4967928 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.55 46.0 3.63e-01 89.7% 71.3%
4972069 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.55 46.0 3.61e-01 89.7% 72.0%
3782606 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.55 46.0 4.08e-01 92.8% 93.8%
2797621 206.1.3.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH-S_ATP 0.54 48.0 3.90e-01 97.9% 86.5%
3251867 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.54 47.0 4.25e-01 94.8% 94.6%
5052551 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.54 47.0 4.33e-01 94.8% 76.8%
5045224 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 42.0 4.55e-01 100.0% 94.1%
3743106 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.54 47.0 4.18e-01 99.0% 78.6%
4946040 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 43.0 2.99e-01 87.6% 26.7%
143428 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.53 46.0 4.29e-01 94.8% 78.3%
3685634 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.53 47.0 3.97e-01 97.9% 83.1%
3385764 4954.1.1.0 a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit 0.53 37.0 4.11e-01 75.3% 94.7%
4055466 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.53 45.0 4.21e-01 94.8% 79.0%
5037345 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.53 45.0 4.08e-01 94.8% 75.9%
3499821 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.52 46.0 4.23e-01 97.9% 79.2%
3725759 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.52 46.0 3.86e-01 97.9% 78.7%
4939583 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.52 43.0 3.52e-01 89.7% 74.4%
4456195 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.52 46.0 4.28e-01 96.9% 80.0%
4976500 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.52 44.0 4.07e-01 93.8% 77.3%
3558235 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.52 45.0 4.08e-01 97.9% 79.3%
4188283 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 37.0 4.04e-01 82.5% 92.5%
3480669 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.51 45.0 4.02e-01 99.0% 95.1%
4983064 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.51 45.0 4.13e-01 95.9% 79.8%
3599659 206.1.3.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DUF7920 0.51 35.0 2.31e-01 70.1% 25.5%
3436491 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.50 44.0 3.73e-01 96.9% 75.6%
4660283 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.50 43.0 4.00e-01 94.8% 76.0%
4822819 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.50 44.0 3.90e-01 97.9% 95.2%
3251045 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.50 44.0 3.76e-01 95.9% 79.9%