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OX241443.1__CAH9011657.1__VP199E371_P0010__00010

Bact-Vir

OX241443.1__CAH9011657.1__VP199E371_P0010__00010

Identity

Accession:
OX241443 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-130
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4linD01 1.20.5.340 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.77 71.0 6.88e-01 100.0% 91.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3857258 621.1.1.1 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GBP_C 0.76 59.0 4.43e-01 82.3% 70.2%
3863010 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.75 52.0 3.59e-01 70.8% 26.4%
3628013 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.74 51.0 4.26e-01 71.5% 41.8%
D2 medium residues 131-209
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v0xA01 1.10.287.3160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 54.0 4.17e-01 73.4% 45.2%
2pohA02 6.10.140.940 Special › Helix non-globular › Helix Hairpins › 0.64 55.0 5.58e-01 91.1% 100.0%
3ooxA00 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.63 48.0 3.27e-01 82.3% 46.9%
2yhwA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 48.0 3.72e-01 92.4% 84.1%
3lmlA01 3.10.450.690 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 3.58e-01 78.5% 66.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3802271 10.12.1.17 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy,DIOX_N 0.67 50.0 3.32e-01 81.0% 47.1%
3724296 10.12.1.17 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy,DIOX_N 0.62 43.0 2.79e-01 72.2% 38.6%
3765317 109.4.1.2519 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12, TPR_16, TTC7_N 0.58 44.0 2.63e-01 81.0% 23.1%