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OX241443.1__CAH9012070.1__VP199E371_P0029__00029

Bact-Vir

OX241443.1__CAH9012070.1__VP199E371_P0029__00029

Identity

Accession:
OX241443 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_199E37-1

TaxID: 2963176

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-57
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.79 61.0 4.71e-01 82.1% 45.6%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.76 55.0 5.28e-01 83.9% 67.2%
3rx6A00 1.20.58.1090 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer 0.76 62.0 4.19e-01 87.5% 99.5%
2i5uA00 1.10.10.630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like 0.70 49.0 4.45e-01 82.1% 54.5%
1gvnA00 1.10.8.130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.66 56.0 4.83e-01 94.6% 92.0%
2db7A01 6.10.250.980 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.65 49.0 5.08e-01 83.9% 86.8%
3g36B00 1.20.890.10 Mainly Alpha › Up-down Bundle › cAMP-dependent Protein Kinase, Chain A › cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain 0.64 47.0 4.92e-01 91.1% 88.2%
2g5gX02 1.10.8.760 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Haem-binding uptake, Tiki superfamily, ChaN, domain 2 0.62 45.0 4.43e-01 76.8% 72.9%
4e12A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 45.0 3.16e-01 82.1% 43.5%
3juwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 41.0 2.98e-01 73.2% 24.0%
1rvkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 43.0 3.36e-01 80.4% 100.0%
2rh8A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 43.0 2.71e-01 94.6% 57.7%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3475201 3652.1.1.2 ↗ alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 › STAR_dimer 0.75 57.0 5.55e-01 80.4% 78.3%
3212581 148.1.3.289 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PKK 0.73 55.0 5.44e-01 80.4% 85.0%
3645744 148.1.1.0 ↗ alpha arrays › Histone-like › Histone-related › Histone 0.72 60.0 5.17e-01 98.2% 58.9%
4003051 5058.1.1.0 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.69 60.0 5.71e-01 96.4% 86.2%
3406963 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.67 56.0 3.41e-01 89.3% 27.3%
4988485 304.41.1.1 ↗ a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N 0.62 53.0 3.69e-01 94.6% 29.7%
3770225 6026.1.1.18 ↗ alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › PF31011 0.61 49.0 4.78e-01 96.4% 83.1%
3552432 4207.1.2.0 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region 0.59 44.0 4.06e-01 85.7% 62.7%
4160562 7577.1.1.6 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › DegT_DnrJ_EryC1 0.53 40.0 2.63e-01 85.7% 87.1%