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OX241464.1__CAH9013623.1__VP277E431_P0110__00110

Bact-Vir

OX241464.1__CAH9013623.1__VP277E431_P0110__00110

Identity

Accession:
OX241464 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-46
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w20B01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.79 53.0 3.02e-01 70.0% 9.0%
1y9kA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.77 65.0 4.78e-01 100.0% 49.6%
1ujcA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.76 51.0 3.37e-01 70.0% 96.2%
1vjnA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.74 49.0 3.13e-01 70.0% 17.5%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.73 49.0 4.17e-01 70.0% 42.4%
3efaA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.73 59.0 4.16e-01 100.0% 41.8%
2i7nA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.72 48.0 3.20e-01 70.0% 17.4%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 48.0 3.60e-01 70.0% 27.2%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.70 55.0 4.21e-01 100.0% 44.2%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 55.0 4.30e-01 100.0% 74.2%
4g59B00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.67 55.0 3.73e-01 100.0% 27.0%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.66 44.0 2.54e-01 70.0% 9.7%
3fy6A01 3.30.2210.10 Alpha Beta › 2-Layer Sandwich › Integron cassette protein fold › Integron cassette protein superfamily 0.65 54.0 4.10e-01 100.0% 68.2%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.64 43.0 3.63e-01 70.0% 40.8%
3nm6B00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.64 48.0 3.11e-01 92.5% 20.5%
1jofA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 54.0 3.17e-01 100.0% 95.1%
2q18X01 3.10.330.40 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.63 56.0 4.64e-01 100.0% 75.7%
2db2A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 42.0 3.26e-01 70.0% 30.9%
4eq3A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 42.0 3.15e-01 70.0% 56.1%
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.62 49.0 3.95e-01 100.0% 65.3%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.62 48.0 4.12e-01 100.0% 60.3%
7szeB01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.62 49.0 3.76e-01 97.5% 86.9%
4euyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 41.0 3.29e-01 70.0% 69.8%
4ktpB02 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.61 48.0 3.91e-01 92.5% 46.3%
3f6zB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.60 49.0 4.03e-01 97.5% 79.7%
1mtpA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.60 49.0 3.87e-01 97.5% 53.8%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.59 46.0 3.74e-01 97.5% 88.4%
1a1xA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.59 49.0 3.69e-01 97.5% 64.2%
1mgtA01 3.30.160.70 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain 0.59 50.0 3.93e-01 100.0% 88.6%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 38.0 3.06e-01 70.0% 29.3%
6k8nA01 3.40.50.140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 44.0 3.07e-01 90.0% 46.8%
1x31C01 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.58 45.0 3.53e-01 95.0% 40.0%
5inwA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.58 45.0 3.51e-01 97.5% 78.7%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.58 36.0 2.64e-01 100.0% 22.0%
3afcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 45.0 2.59e-01 92.5% 17.7%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.57 39.0 3.57e-01 70.0% 52.5%
1noyA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.57 37.0 2.60e-01 70.0% 20.1%
2ljwA00 3.30.428.40 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Protein of unknown function DUF3067 0.56 37.0 2.91e-01 70.0% 71.2%
3oajA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 43.0 3.14e-01 100.0% 72.9%
1gpmA03 3.30.300.10 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.55 40.0 3.27e-01 100.0% 78.7%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.43e-01 97.5% 43.3%
2zylA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.55 45.0 3.28e-01 100.0% 65.9%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 37.0 2.85e-01 72.5% 41.3%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 37.0 3.23e-01 70.0% 43.3%
3mh9A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.54 46.0 2.93e-01 100.0% 64.9%
1p16B02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 42.0 3.02e-01 95.0% 44.4%
1gd5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 39.0 2.99e-01 95.0% 88.5%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 41.0 3.28e-01 100.0% 68.4%
1pj5A03 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.52 44.0 2.82e-01 100.0% 54.5%
3kd4A03 2.60.120.1130 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 3.00e-01 100.0% 42.3%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.51 40.0 3.05e-01 100.0% 98.3%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4941120 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.80 54.0 3.47e-01 70.0% 16.5%
4408024 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.77 50.0 4.39e-01 70.0% 45.0%
5038962 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.75 49.0 4.72e-01 70.0% 60.0%
3712990 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.74 50.0 4.15e-01 70.0% 40.0%
3401205 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 50.0 2.79e-01 70.0% 6.1%
4200272 218.1.1.0 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.73 48.0 3.69e-01 70.0% 30.0%
5011086 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.72 48.0 3.72e-01 70.0% 31.1%
3949336 220.1.1.216 beta barrels › PH domain-like › PH domain-like › PH domain-like › Helicase_IV_N 0.71 47.0 3.45e-01 70.0% 24.5%
3482713 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 47.0 3.27e-01 70.0% 20.7%
3684518 304.107.1.0 a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain 0.70 56.0 4.08e-01 92.5% 40.0%
3476540 4099.1.1.2 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 0.69 59.0 4.20e-01 97.5% 50.8%
4979564 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.69 57.0 4.81e-01 100.0% 54.3%
3325102 902.1.1.0 few secondary structure elements › Amb V allergen › Amb V allergen › Amb V allergen 0.69 46.0 4.81e-01 70.0% 93.3%
3613468 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.67 45.0 3.91e-01 70.0% 43.1%
5082170 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 42.0 2.61e-01 70.0% 10.9%
5038003 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.67 44.0 4.07e-01 70.0% 54.0%
4853039 2484.1.1.10 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.67 44.0 3.69e-01 70.0% 38.4%
3388321 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.66 47.0 2.98e-01 75.0% 29.5%
5035490 206.1.3.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.65 43.0 2.60e-01 70.0% 10.8%
3883146 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.63 42.0 4.12e-01 70.0% 60.0%
4965528 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.63 42.0 2.67e-01 70.0% 12.9%
5008603 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.63 42.0 2.74e-01 70.0% 15.8%
4985980 2484.1.1.21 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.62 49.0 3.14e-01 100.0% 96.6%
4606688 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.62 42.0 3.45e-01 70.0% 37.3%
5011958 4294.1.1.1 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.62 48.0 3.85e-01 100.0% 85.0%
3626212 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 40.0 2.77e-01 70.0% 17.4%
3801630 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.61 50.0 3.72e-01 100.0% 51.7%
3921576 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 40.0 2.85e-01 70.0% 19.3%
3373308 1.1.11.1 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.61 47.0 4.23e-01 95.0% 73.8%
4085772 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.61 41.0 3.42e-01 70.0% 37.3%
3581945 220.1.1.132 beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.60 39.0 3.56e-01 70.0% 43.3%
3302660 109.4.1.1256 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.60 40.0 2.56e-01 70.0% 12.7%
3610916 2484.2.1.0 mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain 0.60 51.0 3.93e-01 100.0% 94.7%
5034425 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 40.0 3.18e-01 70.0% 31.8%
4880118 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.60 40.0 3.44e-01 70.0% 40.0%
5072901 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.59 47.0 3.99e-01 100.0% 56.2%
4948723 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.59 40.0 3.89e-01 70.0% 60.4%
3519113 330.1.1.24 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C 0.58 50.0 3.65e-01 100.0% 56.4%
3924545 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.58 47.0 3.41e-01 95.0% 44.2%
3173269 301.8.1.1 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.57 40.0 2.81e-01 100.0% 24.0%
None 0.56 47.0 2.84e-01 100.0% 43.4%
3973114 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.56 38.0 3.73e-01 70.0% 62.2%
4944549 9.1.1.72 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Biotin_lipoyl 0.56 44.0 3.80e-01 95.0% 87.1%
3783021 719.1.1.2 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.55 43.0 3.26e-01 100.0% 83.3%
4633023 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.55 40.0 2.82e-01 82.5% 47.9%
4963350 220.1.1.323 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7115 0.54 42.0 3.39e-01 100.0% 80.0%
4927204 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 37.0 2.96e-01 92.5% 35.6%
3578128 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.52 43.0 3.95e-01 100.0% 96.4%
5064976 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 42.0 2.85e-01 100.0% 94.4%
3495969 919.1.1.0 few secondary structure elements › Ribosomal protein L36 › Ribosomal protein L36 › Ribosomal protein L36 0.50 35.0 3.47e-01 95.0% 74.4%