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OX241464.1__CAH9014164.1__VP277E431_P0168__00168
Bact-VirOX241464.1__CAH9014164.1__VP277E431_P0168__00168
Identity
- Accession:
- OX241464 ↗
- Kingdom:
- phage
Quality
62.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-53
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.72 | 61.0 | 5.16e-01 | 100.0% | 68.3% |
| 1es6A02 | 2.60.510.10 | Mainly Beta › Sandwich › EV matrix protein fold › EV matrix protein | 0.69 | 57.0 | 4.61e-01 | 100.0% | 96.0% |
| 3au4A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.67 | 54.0 | 4.40e-01 | 100.0% | 45.7% |
| 4bwsF00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.63 | 47.0 | 4.33e-01 | 100.0% | 61.2% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.60 | 52.0 | 3.57e-01 | 100.0% | 91.0% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.59 | 47.0 | 3.97e-01 | 100.0% | 55.4% |
| 4y0eB00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.58 | 41.0 | 2.59e-01 | 78.3% | 48.5% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 44.0 | 3.96e-01 | 100.0% | 64.5% |
| 3flkA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.56 | 40.0 | 2.44e-01 | 80.4% | 27.0% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.56 | 45.0 | 3.75e-01 | 100.0% | 53.2% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 39.0 | 3.12e-01 | 82.6% | 85.6% |
| 7zxkB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 3.75e-01 | 100.0% | 54.4% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 3.37e-01 | 100.0% | 39.4% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.54 | 40.0 | 2.84e-01 | 78.3% | 94.3% |
| 4rslA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.54 | 42.0 | 2.93e-01 | 100.0% | 50.0% |
| 1yuzA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.53 | 35.0 | 3.70e-01 | 100.0% | 78.9% |
| 2mraA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.53 | 42.0 | 3.33e-01 | 100.0% | 45.3% |
| 5x6vG00 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 38.0 | 2.93e-01 | 82.6% | 84.1% |
| 1whoA00 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.53 | 41.0 | 3.32e-01 | 100.0% | 43.6% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4147528 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.74 | 62.0 | 5.54e-01 | 100.0% | 98.6% |
| 5080633 | 304.56.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like | 0.70 | 55.0 | 5.00e-01 | 89.1% | 100.0% |
| 3959440 | 4.1.1.180 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3107 | 0.69 | 58.0 | 5.29e-01 | 100.0% | 96.9% |
| 4015408 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.68 | 46.0 | 2.74e-01 | 71.7% | 33.3% |
| 4231372 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.68 | 55.0 | 5.00e-01 | 100.0% | 97.1% |
| 5022263 | 322.1.1.2 ↗ | a+b two layers › HPr-like › HPr-like › HPr-like › 3H | 0.63 | 53.0 | 4.12e-01 | 97.8% | 99.1% |
| 4962335 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.62 | 50.0 | 4.63e-01 | 100.0% | 73.8% |
| 3782773 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.62 | 48.0 | 4.64e-01 | 100.0% | 78.2% |
| 4039355 | 2004.1.1.258 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 | 0.58 | 43.0 | 2.64e-01 | 84.8% | 75.7% |
| 3600134 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 45.0 | 3.81e-01 | 100.0% | 47.0% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.57 | 45.0 | 4.06e-01 | 100.0% | 64.0% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.57 | 44.0 | 4.09e-01 | 100.0% | 68.6% |
| 4583560 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 45.0 | 4.52e-01 | 100.0% | 97.8% |
| 3699329 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.55 | 40.0 | 2.42e-01 | 78.3% | 67.3% |
| 4958814 | 3457.1.1.3 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II | 0.54 | 40.0 | 2.62e-01 | 84.8% | 30.8% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.54 | 42.0 | 4.27e-01 | 100.0% | 91.1% |
| 3462014 | 221.1.1.159 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF7138 | 0.54 | 43.0 | 3.61e-01 | 100.0% | 81.1% |
| 3998356 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 42.0 | 4.27e-01 | 89.1% | 91.1% |
| 5068178 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.52 | 39.0 | 3.40e-01 | 100.0% | 63.2% |
| 5045852 | 302.4.1.1 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.51 | 39.0 | 3.22e-01 | 100.0% | 50.9% |
| 3929133 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 37.0 | 3.13e-01 | 97.8% | 43.2% |
D2
high
residues 67-134