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OX241560.1__CAH9015293.1__VP177E371_P0024__00024

Bact-Vir

OX241560.1__CAH9015293.1__VP177E371_P0024__00024

Identity

Accession:
OX241560 ↗
Kingdom:
phage

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-61
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yzmA00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.92 64.0 6.65e-01 73.5% 78.3%
4u1cA01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.91 63.0 6.24e-01 73.5% 69.2%
3k59A06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.89 62.0 6.36e-01 73.5% 76.6%
4f3vB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.86 74.0 4.53e-01 93.9% 18.8%
2rklF00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.86 60.0 5.90e-01 73.5% 71.2%
3pwfA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.85 59.0 4.24e-01 73.5% 29.8%
4malA00 1.20.58.2200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 67.0 6.31e-01 87.8% 86.4%
1xnfA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.82 67.0 4.15e-01 89.8% 82.6%
6h5hA00 1.10.150.110 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like 0.82 57.0 5.01e-01 73.5% 50.7%
1d2mA03 6.10.140.240 Special › Helix non-globular › Helix Hairpins › 0.81 56.0 5.07e-01 73.5% 56.1%
7qihA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.80 73.0 5.61e-01 98.0% 63.4%
3oxfA05 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.80 62.0 5.43e-01 85.7% 74.7%
1e2aA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.79 66.0 5.13e-01 91.8% 84.3%
3ph0C00 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.79 64.0 6.28e-01 89.8% 96.2%
1iwpG02 1.10.1510.20 Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Propanediol/glycerol dehydratase, small subunit 0.79 55.0 4.38e-01 73.5% 39.8%
3ly7A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.78 63.0 4.37e-01 89.8% 75.8%
1elwA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.78 68.0 5.07e-01 95.9% 53.8%
2fbnA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.78 70.0 4.85e-01 100.0% 44.4%
4u04B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 66.0 5.39e-01 93.9% 70.5%
4wnfA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 69.0 4.28e-01 100.0% 27.8%
2vq2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 69.0 4.39e-01 100.0% 45.5%
2p58C00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 68.0 5.13e-01 98.0% 58.0%
3qnkC00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.76 66.0 3.72e-01 95.9% 53.4%
3zheD01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.76 67.0 4.36e-01 100.0% 31.7%
2ho1B00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.75 66.0 4.24e-01 100.0% 29.4%
5fzsA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.75 69.0 5.22e-01 100.0% 60.7%
4houB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.75 66.0 4.18e-01 100.0% 27.7%
1a17A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 65.0 4.53e-01 100.0% 41.5%
4gywA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 65.0 5.06e-01 100.0% 61.0%
2ondA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.72 64.0 3.87e-01 100.0% 39.9%
1sumB02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.67 53.0 4.13e-01 93.9% 72.0%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.64 52.0 3.48e-01 100.0% 41.8%
3zihA00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.63 48.0 4.24e-01 89.8% 68.4%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 51.0 4.28e-01 98.0% 78.2%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.60 48.0 4.18e-01 95.9% 67.1%
7k3zG01 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.59 44.0 3.04e-01 89.8% 49.8%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 49.0 4.36e-01 93.9% 78.3%
1r8gA00 3.30.590.20 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › 0.58 49.0 3.02e-01 100.0% 90.1%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 4.11e-01 87.8% 89.4%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 4.05e-01 95.9% 75.0%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.66e-01 87.8% 66.7%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 4.05e-01 87.8% 96.9%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 3.99e-01 93.9% 88.0%
2uvaG12 3.30.70.3330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 42.0 3.21e-01 89.8% 82.8%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.69e-01 91.8% 82.9%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 44.0 3.44e-01 98.0% 42.5%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 45.0 3.83e-01 100.0% 90.5%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 3.94e-01 98.0% 98.6%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 45.0 3.47e-01 100.0% 44.0%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3535877 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.87 71.0 5.22e-01 87.8% 42.5%
3811757 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.86 71.0 4.62e-01 87.8% 25.3%
3168021 604.12.1.2 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 0.84 67.0 5.62e-01 85.7% 73.8%
3736410 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.82 74.0 4.37e-01 100.0% 16.6%
3713542 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.81 74.0 4.39e-01 100.0% 23.9%
3995794 109.51.1.0 alpha superhelices › Repetitive alpha hairpins › TssA helical domains › TssA helical domains 0.81 74.0 6.07e-01 100.0% 76.5%
5022047 109.4.1.95 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.81 73.0 4.55e-01 100.0% 28.0%
3859024 109.4.1.210 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.81 75.0 5.21e-01 100.0% 53.6%
3876892 375.2.1.0 few secondary structure elements › Rubredoxin-like › YfgJ-like › YfgJ-like 0.81 64.0 5.36e-01 85.7% 60.0%
3834059 650.1.1.1 alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.80 66.0 4.46e-01 89.8% 59.2%
3269191 109.4.1.1573 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29376 0.80 67.0 5.02e-01 93.9% 64.7%
3711850 109.4.1.202 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.79 72.0 5.04e-01 100.0% 43.1%
3992046 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.79 73.0 5.26e-01 100.0% 76.0%
3231504 109.4.1.1841 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_11 0.79 72.0 4.74e-01 100.0% 36.1%
3316807 109.4.1.1357 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_16 0.78 71.0 4.33e-01 100.0% 23.6%
4235209 109.4.1.192 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.78 69.0 4.63e-01 95.9% 38.2%
3753751 109.4.1.1454 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_17 0.77 69.0 5.01e-01 100.0% 52.3%
1148591 109.4.1.1320 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_10, TPR_12 0.77 69.0 4.07e-01 100.0% 20.5%
3758473 109.4.1.202 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.77 67.0 5.08e-01 95.9% 85.5%
3457800 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.77 69.0 5.40e-01 100.0% 69.0%
3592974 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.77 67.0 4.14e-01 95.9% 37.3%
3271631 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 71.0 4.85e-01 100.0% 44.7%
4224289 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 68.0 4.69e-01 100.0% 41.9%
3413217 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.76 58.0 4.41e-01 83.7% 100.0%
4600952 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 68.0 5.19e-01 100.0% 60.9%
3915211 109.4.1.1286 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12 0.75 66.0 4.56e-01 100.0% 43.0%
5062836 109.4.1.202 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.75 66.0 4.68e-01 98.0% 44.1%
3329843 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.74 59.0 3.73e-01 89.8% 40.8%
3285335 109.4.1.462 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_4 0.74 67.0 5.22e-01 100.0% 68.0%
3931057 558.1.1.0 alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain 0.74 68.0 6.29e-01 100.0% 96.7%
3471773 7005.1.1.4 a+b duplicates or obligate multimers › LUBAC-tethering domain › LUBAC-tethering domain › LUBAC-tethering domain › BRWD1_N 0.73 67.0 6.25e-01 100.0% 90.0%
5027336 109.4.1.5 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.73 64.0 4.13e-01 100.0% 29.3%
4952542 208.1.1.1 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep 0.73 65.0 4.19e-01 100.0% 27.7%
3583484 558.1.1.21 alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain › BRWD1_N 0.71 63.0 5.23e-01 100.0% 63.5%
3367395 109.4.1.2334 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, PPR_long, E_motif 0.69 60.0 3.86e-01 100.0% 26.7%
3796688 140.1.1.0 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.69 53.0 3.44e-01 87.8% 31.1%
3553587 558.1.1.21 alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain › BRWD1_N 0.68 60.0 4.57e-01 100.0% 47.0%
1405082 4.21.1.1 beta barrels › SH3 › ImpE-like › ImpE-like › ImpE 0.68 60.0 4.11e-01 100.0% 33.7%
3966441 4.21.1.0 beta barrels › SH3 › ImpE-like › ImpE-like 0.67 60.0 4.09e-01 100.0% 33.1%
4983256 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.65 50.0 4.39e-01 89.8% 73.4%
3279756 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.61 50.0 3.63e-01 91.8% 52.9%
4990517 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.61 47.0 3.07e-01 85.7% 47.1%
4996877 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 50.0 3.91e-01 91.8% 61.0%
3626410 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 44.0 3.35e-01 100.0% 34.5%
5045234 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 53.0 4.64e-01 100.0% 89.0%
3402809 101.1.2.160 alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.60 49.0 4.05e-01 89.8% 78.8%
4927412 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 3.88e-01 89.8% 72.9%
4028116 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.56 45.0 3.79e-01 89.8% 69.4%
4004031 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 47.0 3.95e-01 98.0% 82.2%
5046905 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 47.0 3.97e-01 100.0% 90.0%
3595354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 44.0 3.17e-01 87.8% 42.1%
5059445 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.55 47.0 3.88e-01 100.0% 89.2%
5024565 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.55 45.0 3.33e-01 93.9% 49.6%
5063692 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.53 46.0 4.24e-01 100.0% 93.8%
5003985 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.53 46.0 3.37e-01 100.0% 54.8%
4990227 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.53 46.0 4.32e-01 100.0% 100.0%
4943397 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 3.90e-01 93.9% 97.1%