←Back to structures
OX241566.1__CAH9015866.1__VP137E351_P0031__00031
Bact-VirOX241566.1__CAH9015866.1__VP137E351_P0031__00031
Identity
- Accession:
- OX241566 ↗
- Kingdom:
- phage
Quality
66.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-68
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 49.0 | 4.47e-01 | 100.0% | 54.7% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 46.0 | 4.48e-01 | 98.2% | 61.5% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.69 | 45.0 | 4.17e-01 | 93.0% | 52.0% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 47.0 | 4.59e-01 | 98.2% | 68.3% |
| 1g3pA02 | 3.90.450.1 | Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 | 0.64 | 45.0 | 3.76e-01 | 75.4% | 43.3% |
| 1dq3A02 | 3.30.160.90 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 44.0 | 4.03e-01 | 77.2% | 96.1% |
| 2x9aA00 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.60 | 42.0 | 4.14e-01 | 73.7% | 68.9% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 45.0 | 3.68e-01 | 100.0% | 45.6% |
| 1o70A02 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.58 | 48.0 | 3.59e-01 | 94.7% | 41.0% |
| 1epwA04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 46.0 | 3.22e-01 | 87.7% | 83.8% |
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.58 | 51.0 | 4.94e-01 | 100.0% | 87.3% |
| 1xg9A02 | 3.10.25.20 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › | 0.55 | 43.0 | 4.23e-01 | 100.0% | 82.3% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.55 | 38.0 | 3.02e-01 | 75.4% | 72.5% |
| 1qhuA01 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.55 | 46.0 | 3.35e-01 | 100.0% | 63.4% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 33.0 | 3.48e-01 | 86.0% | 64.0% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 36.0 | 3.48e-01 | 94.7% | 57.1% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 34.0 | 3.40e-01 | 96.5% | 69.0% |
| 1nztA01 | 3.30.230.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › lpxc deacetylase, domain 1 | 0.50 | 34.0 | 2.84e-01 | 71.9% | 42.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4565837 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.70 | 51.0 | 4.28e-01 | 100.0% | 46.3% |
| 406956 | 392.1.1.1 ↗ | beta meanders › N-terminal domains of the minor coat protein g3p › N-terminal domains of the minor coat protein g3p › N-terminal domains of the minor coat protein g3p › Phage_Coat_A | 0.62 | 44.0 | 4.28e-01 | 73.7% | 67.7% |
| 3275056 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.62 | 43.0 | 2.95e-01 | 73.7% | 39.7% |
| 3670161 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 45.0 | 4.59e-01 | 98.2% | 81.8% |
| 3584429 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.61 | 41.0 | 3.14e-01 | 70.2% | 71.1% |
| 3967527 | 4216.1.1.1 ↗ | a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS | 0.60 | 41.0 | 3.04e-01 | 73.7% | 65.7% |
| 3624143 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.60 | 38.0 | 3.89e-01 | 89.5% | 67.3% |
| 4964190 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 43.0 | 3.48e-01 | 78.9% | 77.4% |
| 5051108 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.55 | 46.0 | 3.57e-01 | 94.7% | 41.5% |
| 3999194 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.52 | 31.0 | 3.71e-01 | 84.2% | 97.1% |
| 4444951 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.52 | 34.0 | 3.40e-01 | 84.2% | 65.0% |
| 3921237 | 391.1.2.13 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1-VW_OTOGL | 0.51 | 34.0 | 2.47e-01 | 100.0% | 21.0% |