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OX241568.1__CAH9015669.1__VP282E431_P0020__00020
Bact-VirOX241568.1__CAH9015669.1__VP282E431_P0020__00020
Identity
- Accession:
- OX241568 ↗
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-62
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mekA02 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 53.0 | 5.43e-01 | 72.0% | 73.5% |
| 2yzsA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.76 | 53.0 | 3.38e-01 | 74.0% | 27.2% |
| 1gkuB06 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.73 | 43.0 | 2.95e-01 | 72.0% | 17.9% |
| 6lpfA01 | 1.10.730.20 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › | 0.68 | 52.0 | 3.57e-01 | 94.0% | 25.2% |
| 2xjyA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.66 | 47.0 | 4.40e-01 | 76.0% | 82.5% |
| 2iybE00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.66 | 51.0 | 4.76e-01 | 88.0% | 100.0% |
| 2itaA01 | 1.20.5.920 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › rhodobacter sphaeroides pufx membrane protein | 0.65 | 46.0 | 4.49e-01 | 100.0% | 67.9% |
| 1x6aA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.65 | 46.0 | 4.34e-01 | 76.0% | 82.3% |
| 1wimA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 45.0 | 3.69e-01 | 74.0% | 55.3% |
| 2xqnT01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.63 | 45.0 | 4.20e-01 | 76.0% | 79.0% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 53.0 | 4.37e-01 | 92.0% | 72.1% |
| 2d8yA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.62 | 48.0 | 4.26e-01 | 84.0% | 81.9% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 3.85e-01 | 92.0% | 59.7% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 54.0 | 4.45e-01 | 98.0% | 54.4% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 56.0 | 4.66e-01 | 100.0% | 62.4% |
| 3vd6C01 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.61 | 42.0 | 4.46e-01 | 72.0% | 92.7% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.60 | 40.0 | 2.96e-01 | 70.0% | 35.8% |
| 2hekA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.60 | 51.0 | 3.19e-01 | 96.0% | 36.3% |
| 4kfzA02 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.59 | 46.0 | 4.42e-01 | 96.0% | 100.0% |
| 4byfA01 | 1.20.5.4820 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 49.0 | 4.12e-01 | 96.0% | 54.4% |
| 1a7iA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.59 | 40.0 | 3.90e-01 | 74.0% | 83.3% |
| 6g1dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 50.0 | 4.28e-01 | 96.0% | 58.5% |
| 3fk5A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.59 | 44.0 | 3.19e-01 | 94.0% | 29.3% |
| 4hi8B00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.58 | 45.0 | 4.12e-01 | 90.0% | 87.5% |
| 3ay3A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 46.0 | 2.98e-01 | 86.0% | 18.9% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 46.0 | 3.85e-01 | 96.0% | 50.6% |
| 2dj7A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.57 | 46.0 | 4.15e-01 | 100.0% | 78.8% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 46.0 | 3.38e-01 | 96.0% | 51.0% |
| 3skvA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.57 | 45.0 | 3.00e-01 | 88.0% | 43.0% |
| 2lp7A00 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 41.0 | 3.96e-01 | 100.0% | 69.5% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 47.0 | 3.78e-01 | 94.0% | 72.6% |
| 1x62A01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.55 | 43.0 | 4.11e-01 | 90.0% | 100.0% |
| 7febA03 | 3.40.50.12790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 | 0.55 | 40.0 | 3.33e-01 | 80.0% | 43.5% |
| 3lfjB00 | 3.40.35.10 | Alpha Beta › 3-Layer(aba) Sandwich › Fructose Permease › Phosphotransferase system, sorbose subfamily IIB component | 0.54 | 39.0 | 2.75e-01 | 78.0% | 78.3% |
| 6y9tB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 42.0 | 2.56e-01 | 92.0% | 11.8% |
| 2bgcA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 39.0 | 3.04e-01 | 78.0% | 60.4% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 44.0 | 3.34e-01 | 98.0% | 63.6% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3807145 | 376.1.2.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT | 0.87 | 63.0 | 5.67e-01 | 76.0% | 58.5% |
| 3682543 | 377.1.1.33 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FLZ | 0.83 | 67.0 | 6.95e-01 | 88.0% | 97.8% |
| 3301457 | 931.1.1.7 ↗ | few secondary structure elements › Metallothionein › Metallothionein › Metallothionein › VATC | 0.82 | 55.0 | 6.35e-01 | 70.0% | 100.0% |
| 3238594 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.79 | 55.0 | 6.04e-01 | 78.0% | 92.5% |
| 3817696 | 376.1.2.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT | 0.76 | 54.0 | 5.05e-01 | 76.0% | 61.7% |
| 5030292 | 931.1.1.0 ↗ | few secondary structure elements › Metallothionein › Metallothionein › Metallothionein | 0.75 | 51.0 | 5.60e-01 | 74.0% | 100.0% |
| 3714085 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.73 | 54.0 | 5.90e-01 | 82.0% | 97.5% |
| 3495690 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.72 | 52.0 | 4.87e-01 | 76.0% | 96.7% |
| 3816328 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.72 | 61.0 | 3.72e-01 | 96.0% | 38.7% |
| 3498119 | 376.1.3.35 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › LIM | 0.70 | 50.0 | 4.61e-01 | 76.0% | 87.7% |
| 3928741 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.70 | 50.0 | 4.15e-01 | 76.0% | 61.2% |
| 5067072 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.70 | 49.0 | 4.90e-01 | 76.0% | 74.0% |
| 3927094 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.70 | 52.0 | 4.69e-01 | 82.0% | 61.4% |
| 4940794 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.69 | 49.0 | 4.91e-01 | 76.0% | 74.0% |
| 3879357 | 377.1.1.30 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › IRF-2BP1_2 | 0.69 | 51.0 | 5.38e-01 | 80.0% | 100.0% |
| 3898776 | 376.1.1.92 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › IRF-2BP1_2 | 0.69 | 51.0 | 5.16e-01 | 80.0% | 93.9% |
| 3435304 | 376.1.1.52 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › LIM | 0.68 | 45.0 | 4.19e-01 | 70.0% | 76.9% |
| 3917117 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.68 | 48.0 | 4.57e-01 | 76.0% | 88.3% |
| 3252156 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.67 | 46.0 | 4.99e-01 | 72.0% | 92.5% |
| 4000791 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.67 | 44.0 | 4.69e-01 | 72.0% | 82.5% |
| 3511728 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.67 | 45.0 | 4.71e-01 | 70.0% | 80.0% |
| 3914982 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.66 | 46.0 | 4.36e-01 | 74.0% | 85.0% |
| 3833476 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.66 | 47.0 | 4.46e-01 | 76.0% | 83.3% |
| 3268530 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.66 | 48.0 | 5.13e-01 | 82.0% | 100.0% |
| 3746975 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.66 | 48.0 | 4.66e-01 | 78.0% | 87.3% |
| 3504555 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.65 | 51.0 | 4.38e-01 | 86.0% | 82.5% |
| 4941565 | 377.1.1.135 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF7685 | 0.65 | 47.0 | 5.10e-01 | 84.0% | 100.0% |
| 3336883 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.64 | 45.0 | 4.73e-01 | 76.0% | 93.3% |
| 5077504 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.64 | 52.0 | 3.16e-01 | 98.0% | 13.7% |
| 3697192 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.63 | 43.0 | 3.95e-01 | 70.0% | 53.8% |
| 3529042 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.63 | 43.0 | 4.38e-01 | 70.0% | 72.0% |
| 3903161 | 377.1.1.20 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Vps39_2 | 0.62 | 42.0 | 4.48e-01 | 70.0% | 90.0% |
| 2403280 | 931.1.1.3 ↗ | few secondary structure elements › Metallothionein › Metallothionein › Metallothionein › Metallothio_Pro | 0.62 | 42.0 | 4.21e-01 | 72.0% | 94.2% |
| 3519190 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.61 | 43.0 | 4.54e-01 | 76.0% | 82.2% |
| 3256364 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.61 | 50.0 | 4.47e-01 | 90.0% | 90.0% |
| 4000128 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 49.0 | 4.06e-01 | 88.0% | 67.1% |
| 3470972 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.60 | 46.0 | 4.44e-01 | 88.0% | 100.0% |
| 3407901 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.60 | 44.0 | 4.36e-01 | 82.0% | 87.3% |
| 3707608 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.60 | 48.0 | 3.91e-01 | 92.0% | 56.0% |
| 3395505 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.58 | 40.0 | 4.09e-01 | 76.0% | 82.2% |
| 4979152 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.56 | 44.0 | 3.58e-01 | 86.0% | 71.6% |
| 4027159 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.56 | 37.0 | 2.82e-01 | 72.0% | 29.6% |
| 2613 | 101.1.2.105 ↗ | alpha arrays › HTH › HTH › winged helix domain › MotA_activ | 0.55 | 47.0 | 3.78e-01 | 94.0% | 72.6% |
| 3598301 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 41.0 | 3.58e-01 | 96.0% | 51.1% |
D2
high
residues 67-179
Domain cluster:
rep: NC_070773.1__YP_010649793.1__PP410_gp58__00058__D3-114