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OX241572.1__CAH9015754.1__VP275E431_P0016__00016

Bact-Vir

OX241572.1__CAH9015754.1__VP275E431_P0016__00016

Identity

Accession:
OX241572 ↗
Kingdom:
phage

Quality

81.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zobellviridae› Vibrio_phage_275E43-1

TaxID: 2963184

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 54-145
PDB
Domain cluster: rep: BML_coassembly_scaffold_13_prodigal-single.1__X__X__00261__D167-247
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05345.19 best He_PIG 28.9 1.70e-06 92.4% 63.5%
D2 high residues 165-271
PDB
Domain cluster: representative
D3 medium residues 272-346_394-426_456-481
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ecqA01 2.60.120.870 Mainly Beta › Sandwich › Jelly Rolls › 0.54 43.0 3.86e-01 84.3% 84.2%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.91e-01 93.3% 80.9%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 30.0 3.16e-01 78.4% 60.8%
4ozxA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.43e-01 92.5% 74.7%
1vhxB00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.50 32.0 3.24e-01 73.1% 61.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3496930 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 52.0 4.22e-01 98.5% 94.1%
3255179 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.58 46.0 4.33e-01 82.8% 95.6%
3597078 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.56 50.0 4.44e-01 98.5% 93.3%
3474380 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.51 43.0 3.75e-01 94.8% 84.2%
3937782 2484.1.1.9 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.50 31.0 2.96e-01 79.1% 49.7%
D4 medium residues 347-393_427-455
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.75 52.0 4.23e-01 72.4% 54.0%
3h3lC00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.75 55.0 3.84e-01 76.3% 45.3%
3hbkA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.75 55.0 3.81e-01 76.3% 41.1%
4ym3C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.74 51.0 4.12e-01 71.1% 54.3%
3ap9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.74 53.0 4.19e-01 75.0% 51.0%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.73 61.0 4.25e-01 89.5% 44.0%
1epwA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.73 60.0 4.20e-01 88.2% 41.6%
3azwA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.73 60.0 4.18e-01 88.2% 41.7%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 53.0 4.33e-01 77.6% 58.0%
2jkbA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 58.0 4.30e-01 86.8% 52.1%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 57.0 4.21e-01 86.8% 52.0%
2vy0B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 54.0 3.65e-01 80.3% 37.6%
1w2tA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.69 50.0 4.14e-01 76.3% 46.3%
3pvnA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 61.0 4.48e-01 100.0% 51.0%
4ogcA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.64 45.0 3.33e-01 72.4% 87.0%
1ajoA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 57.0 4.07e-01 100.0% 43.4%
3h1qA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 48.0 3.87e-01 88.2% 90.2%
5vxzA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 52.0 3.83e-01 100.0% 46.1%
2pt7C01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 39.0 3.52e-01 72.4% 87.7%
4twlA00 3.10.200.10 Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase 0.56 39.0 2.80e-01 73.7% 72.0%
7kfuC01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.52 35.0 3.55e-01 77.6% 69.3%
2rh0A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 36.0 3.89e-01 73.7% 93.8%
3hkzG00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 35.0 3.13e-01 72.4% 65.5%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1317200 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.76 58.0 4.08e-01 80.3% 43.8%
3702424 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.76 61.0 5.14e-01 86.8% 74.4%
3174990 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.75 68.0 4.91e-01 100.0% 51.0%
3997948 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.75 54.0 4.26e-01 76.3% 44.5%
3701432 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.74 61.0 5.28e-01 86.8% 86.4%
3298595 10.1.1.11 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.72 52.0 4.06e-01 75.0% 58.7%
3771517 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.71 57.0 4.09e-01 86.8% 39.1%
3877378 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.71 58.0 4.39e-01 88.2% 53.7%
3779878 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.71 65.0 5.05e-01 100.0% 65.6%
4938961 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.71 58.0 4.08e-01 88.2% 40.6%
3394312 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.69 54.0 4.27e-01 85.5% 47.5%
5030605 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.69 56.0 4.56e-01 88.2% 62.9%
3765454 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.69 54.0 4.53e-01 85.5% 66.2%
4932515 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 47.0 3.95e-01 75.0% 91.2%
3181175 10.1.1.11 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.63 57.0 3.81e-01 100.0% 54.3%
3791045 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.62 56.0 4.52e-01 98.7% 67.1%
3995842 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.61 54.0 4.02e-01 100.0% 44.3%
3519113 330.1.1.24 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C 0.60 43.0 3.72e-01 73.7% 84.5%
3496930 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 54.0 3.69e-01 100.0% 40.0%
3585077 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.58 53.0 4.54e-01 100.0% 70.8%
1868485 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.57 42.0 3.37e-01 77.6% 85.5%
3997314 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.57 51.0 3.93e-01 100.0% 50.0%
3867088 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.56 51.0 3.85e-01 100.0% 48.3%
4359442 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.56 51.0 3.70e-01 98.7% 43.5%
3847961 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.56 51.0 3.81e-01 100.0% 48.9%
3197107 76.1.1.2 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Jacalin 0.53 37.0 3.04e-01 75.0% 73.6%
4972712 218.4.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.52 36.0 3.16e-01 71.1% 59.1%
3783813 5.1.4.179 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 0.50 43.0 2.85e-01 100.0% 43.1%